Package: Streamer Type: Package Title: Enabling stream processing of large files Version: 1.24.0 Author: Martin Morgan, Nishant Gopalakrishnan Maintainer: Martin Morgan <martin.morgan@roswellpark.org> Description: Large data files can be difficult to work with in R, where data generally resides in memory. This package encourages a style of programming where data is 'streamed' from disk into R via a `producer' and through a series of `consumers' that, typically reduce the original data to a manageable size. The package provides useful Producer and Consumer stream components for operations such as data input, sampling, indexing, and transformation; see package?Streamer for details. License: Artistic-2.0 LazyLoad: yes Imports: methods, graph, RBGL, parallel, BiocGenerics Suggests: RUnit, Rsamtools (>= 1.5.53), GenomicAlignments, Rgraphviz biocViews: Infrastructure, DataImport Collate: AllGenerics.R Streamer-class.R Producer-class.R Consumer-class.R Stream-class.R ConnectionProducer-classes.R RawInput-class.R Seq-class.R Downsample-class.R FunctionProducerConsumer-classes.R ParallelParam-classes.R Team-class.R Team-methods.R Reducer-class.R DAGParam-class.R DAGParam-methods.R DAGTeam-class.R Utility-classes.R lapply-methods.R stream-methods.R plot-methods.R zzz.R