1. StarBioTrek
  2. DESCRIPTION
Browse code

bump x.y.z version to odd y following creation of RELEASE_3_17 branch

J Wokaty authored on 25/04/2023 14:50:46
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DESCRIPTION
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.26.0
4 
+Version: 1.27.0
5 5 
 Date: 04-16-2019
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

bump x.y.z version to even y prior to creation of RELEASE_3_17 branch

J Wokaty authored on 25/04/2023 14:50:46
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DESCRIPTION
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.25.0
4 
+Version: 1.26.0
5 5 
 Date: 04-16-2019
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

bump x.y.z version to odd y following creation of RELEASE_3_16 branch

J Wokaty authored on 01/11/2022 15:14:46
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DESCRIPTION
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.24.0
4 
+Version: 1.25.0
5 5 
 Date: 04-16-2019
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

bump x.y.z version to even y prior to creation of RELEASE_3_16 branch

J Wokaty authored on 01/11/2022 15:14:46
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.23.0
4 
+Version: 1.24.0
5 5 
 Date: 04-16-2019
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

bump x.y.z version to odd y following creation of RELEASE_3_15 branch

Nitesh Turaga authored on 26/04/2022 15:37:09
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DESCRIPTION
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.22.0
4 
+Version: 1.23.0
5 5 
 Date: 04-16-2019
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

bump x.y.z version to even y prior to creation of RELEASE_3_15 branch

Nitesh Turaga authored on 26/04/2022 15:37:09
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DESCRIPTION
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.21.0
4 
+Version: 1.22.0
5 5 
 Date: 04-16-2019
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

bump x.y.z version to odd y following creation of RELEASE_3_14 branch

Nitesh Turaga authored on 26/10/2021 16:31:11
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.20.0
4 
+Version: 1.21.0
5 5 
 Date: 04-16-2019
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

bump x.y.z version to even y prior to creation of RELEASE_3_14 branch

Nitesh Turaga authored on 26/10/2021 16:31:11
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DESCRIPTION
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.19.0
4 
+Version: 1.20.0
5 5 
 Date: 04-16-2019
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

bump x.y.z version to odd y following creation of RELEASE_3_13 branch

Nitesh Turaga authored on 19/05/2021 16:24:11
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DESCRIPTION
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.18.0
4 
+Version: 1.19.0
5 5 
 Date: 04-16-2019
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

bump x.y.z version to even y prior to creation of RELEASE_3_13 branch

Nitesh Turaga authored on 19/05/2021 16:24:11
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DESCRIPTION
History View file @ 4e39230
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.17.0
4 
+Version: 1.18.0
5 5 
 Date: 04-16-2019
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

bump x.y.z version to odd y following creation of RELEASE_3_12 branch

Nitesh Turaga authored on 27/10/2020 15:19:06
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DESCRIPTION
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.16.0
4 
+Version: 1.17.0
5 5 
 Date: 04-16-2019
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

bump x.y.z version to even y prior to creation of RELEASE_3_12 branch

Nitesh Turaga authored on 27/10/2020 15:19:06
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DESCRIPTION
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.15.0
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+Version: 1.16.0
5 5 
 Date: 04-16-2019
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

bump x.y.z version to odd y following creation of RELEASE_3_11 branch

Nitesh Turaga authored on 27/04/2020 19:03:16
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DESCRIPTION
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.14.0
4 
+Version: 1.15.0
5 5 
 Date: 04-16-2019
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

bump x.y.z version to even y prior to creation of RELEASE_3_11 branch

Nitesh Turaga authored on 27/04/2020 19:03:16
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DESCRIPTION
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.13.0
4 
+Version: 1.14.0
5 5 
 Date: 04-16-2019
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

bump x.y.z version to odd y after creation of RELEASE_3_10 branch

Nitesh Turaga authored on 29/10/2019 17:42:10
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.12.0
4 
+Version: 1.13.0
5 5 
 Date: 04-16-2019
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

bump x.y.z version to even y prior to creation of RELEASE_3_10 branch

Nitesh Turaga authored on 29/10/2019 17:10:13
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.11.0
4 
+Version: 1.12.0
5 5 
 Date: 04-16-2019
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

bump x.y.z versions to odd y after creation of RELEASE_3_9 branch

Nitesh Turaga authored on 02/05/2019 16:14:00
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.10.0
4 
+Version: 1.11.0
5 5 
 Date: 04-16-2019
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

bump x.y.z versions to even y prior to creation of RELEASE_3_9 branch

Nitesh Turaga authored on 02/05/2019 15:54:04
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.9.5
4 
+Version: 1.10.0
5 5 
 Date: 04-16-2019
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
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'prova'

claudia.cava authored on 16/04/2019 11:04:47
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.9.4
5 
-Date: 04-15-2019
4 
+Version: 1.9.5
5 
+Date: 04-16-2019
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
8 8 
 Maintainer: Claudia Cava <claudia.cava@ibfm.cnr.it>
Browse code

'version'

claudia.cava authored on 15/04/2019 11:27:34
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.9.3
4 
+Version: 1.9.4
5 5 
 Date: 04-15-2019
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

'try1'

claudia.cava authored on 15/04/2019 11:00:25
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DESCRIPTION
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@@ -1,7 +1,7 @@
1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.8.2
4 
+Version: 1.9.3
5 5 
 Date: 04-15-2019
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

Update version bump

claudia.cava authored on 15/04/2019 09:02:52
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.9.2
5 
-Date: 04-12-2019
4 
+Version: 1.8.2
5 
+Date: 04-15-2019
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
8 8 
 Maintainer: Claudia Cava <claudia.cava@ibfm.cnr.it>
Browse code

update1.9.2

claudia.cava authored on 12/04/2019 16:08:34
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DESCRIPTION
History View file @ 4313402
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@@ -1,7 +1,7 @@
1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.8.2
4 
+Version: 1.9.2
5 5 
 Date: 04-12-2019
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

update

claudia.cava authored on 12/04/2019 15:57:16
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DESCRIPTION
History View file @ 8be0a4f
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@@ -1,8 +1,8 @@
1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.8.1
5 
-Date: 11-13-2018
4 
+Version: 1.8.2
5 
+Date: 04-12-2019
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
8 8 
 Maintainer: Claudia Cava <claudia.cava@ibfm.cnr.it>
... ... 
@@ -10,13 +10,15 @@ Depends:
10 10 
     R (>= 3.3)
11 11 
 Imports:
12 12 
     SpidermiR,
13 
-	KEGGREST,
14 
-	org.Hs.eg.db,
13 
+	graphite,
15 14 
 	AnnotationDbi,
16 15 
 	e1071,
17 16 
 	ROCR,
17 
+	MLmetrics,
18 18 
 	grDevices,
19 
-	igraph
19 
+	igraph,
20 
+	reshape2,
21 
+	ggplot2
20 22 
 Description: This tool StarBioTrek presents some methodologies to measure pathway activity and cross-talk among pathways integrating also the information of network data.
21 23 
 License: GPL (>= 3)
22 24 
 biocViews: GeneRegulation,
... ... 
@@ -37,5 +39,4 @@ VignetteBuilder: knitr
37 39 
 LazyData: true
38 40 
 URL: https://github.com/claudiacava/StarBioTrek
39 41 
 BugReports: https://github.com/claudiacava/StarBioTrek/issues
40 
-RoxygenNote: 6.0.1
41 
-
42 
+RoxygenNote: 6.1.1
Browse code

update release

claudia.cava authored on 13/11/2018 11:08:59
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History View file @ 150cbc4
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.9.1
5 
-Date: 11-09-2018
4 
+Version: 1.8.1
5 
+Date: 11-13-2018
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
8 8 
 Maintainer: Claudia Cava <claudia.cava@ibfm.cnr.it>
Browse code

update_9_november_2018

claudia.cava authored on 09/11/2018 14:17:46
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.9.0
5 
-Date: 10-16-2017
4 
+Version: 1.9.1
5 
+Date: 11-09-2018
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
8 8 
 Maintainer: Claudia Cava <claudia.cava@ibfm.cnr.it>
Browse code

bump x.y.z versions to odd y after creation of RELEASE_3_8 branch

vobencha authored on 30/10/2018 15:54:36
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.8.0
4 
+Version: 1.9.0
5 5 
 Date: 10-16-2017
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

bump x.y.z versions to even y prior to creation of RELEASE_3_8 branch

vobencha authored on 30/10/2018 15:42:03
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.7.1
4 
+Version: 1.8.0
5 5 
 Date: 10-16-2017
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

replace BiocInstaller biocLite mentions with BiocManager

LiNk-NY authored on 30/08/2018 17:56:53
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.7.0
4 
+Version: 1.7.1
5 5 
 Date: 10-16-2017
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

bump x.y.z versions to odd y after creation of RELEASE_3_7 branch

vobencha authored on 30/04/2018 14:41:42
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.6.0
4 
+Version: 1.7.0
5 5 
 Date: 10-16-2017
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

bump x.y.z versions to even y prior to creation of RELEASE_3_7 branch

vobencha authored on 30/04/2018 14:35:44
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.5.0
4 
+Version: 1.6.0
5 5 
 Date: 10-16-2017
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

bump x.y.z versions to odd y after creation of RELEASE_3_6 branch

Hervé Pagès authored on 30/10/2017 16:54:22
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History View file @ 0726f7e
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.4.0
4 
+Version: 1.5.0
5 5 
 Date: 10-16-2017
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

bump x.y.z versions to even y prior to creation of RELEASE_3_6 branch

Hervé Pagès authored on 30/10/2017 16:41:23
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History View file @ 61789b0
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@@ -1,7 +1,7 @@
1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.3.2
4 
+Version: 1.4.0
5 5 
 Date: 10-16-2017
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

fix

claudiacava authored on 16/10/2017 14:36:16
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History View file @ 809bb0f
1 1 
new file mode 100644
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@@ -0,0 +1,41 @@
1 
+Package: StarBioTrek
2 
+Type: Package
3 
+Title: StarBioTrek
4 
+Version: 1.3.2
5 
+Date: 10-16-2017
6 
+Author: Claudia Cava,
7 
+    Isabella Castiglioni
8 
+Maintainer: Claudia Cava <claudia.cava@ibfm.cnr.it>
9 
+Depends:
10 
+    R (>= 3.3)
11 
+Imports:
12 
+    SpidermiR,
13 
+	KEGGREST,
14 
+	org.Hs.eg.db,
15 
+	AnnotationDbi,
16 
+	e1071,
17 
+	ROCR,
18 
+	grDevices,
19 
+	igraph
20 
+Description: This tool StarBioTrek presents some methodologies to measure pathway activity and cross-talk among pathways integrating also the information of network data.
21 
+License: GPL (>= 3)
22 
+biocViews: GeneRegulation,
23 
+    Network,
24 
+	Pathways,
25 
+	KEGG
26 
+Suggests:
27 
+    BiocStyle,
28 
+    knitr,
29 
+    rmarkdown,
30 
+    testthat,
31 
+	devtools,
32 
+	roxygen2,
33 
+	qgraph,
34 
+	png,
35 
+	grid
36 
+VignetteBuilder: knitr
37 
+LazyData: true
38 
+URL: https://github.com/claudiacava/StarBioTrek
39 
+BugReports: https://github.com/claudiacava/StarBioTrek/issues
40 
+RoxygenNote: 6.0.1
41 
+
Browse code

fix

claudiacava authored on 16/10/2017 14:29:48
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deleted file mode 100644
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1 
-Package: StarBioTrek
2 
-Type: Package
3 
-Title: StarBioTrek
4 
-Version: 1.3.1
5 
-Date: 06-05-2017
6 
-Author: Claudia Cava,
7 
-    Isabella Castiglioni
8 
-Maintainer: Claudia Cava <claudia.cava@ibfm.cnr.it>
9 
-Depends:
10 
-    R (>= 3.3)
11 
-Imports:
12 
-    SpidermiR,
13 
-	KEGGREST,
14 
-	org.Hs.eg.db,
15 
-	AnnotationDbi,
16 
-	e1071,
17 
-	ROCR,
18 
-	grDevices,
19 
-	igraph
20 
-Description: This tool StarBioTrek presents some methodologies to measure pathway activity and cross-talk among pathways integrating also the information of network data.
21 
-License: GPL (>= 3)
22 
-biocViews: GeneRegulation,
23 
-    Network,
24 
-	Pathways,
25 
-	KEGG
26 
-Suggests:
27 
-    BiocStyle,
28 
-    knitr,
29 
-    rmarkdown,
30 
-    testthat,
31 
-	devtools,
32 
-	roxygen2,
33 
-	qgraph,
34 
-	png,
35 
-	grid
36 
-VignetteBuilder: knitr
37 
-LazyData: true
38 
-URL: https://github.com/claudiacava/StarBioTrek
39 
-BugReports: https://github.com/claudiacava/StarBioTrek/issues
40 
-RoxygenNote: 6.0.1
Browse code

number version fix

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/StarBioTrek@130107 bc3139a8-67e5-0310-9ffc-ced21a209358

Claudia Cava authored on 05/06/2017 07:18:58
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-<<<<<<< .mine
5 
-Version: 1.2.1
6 
-Date: 05-12-2017
7 
-=======
8 
-Version: 1.3.0
9 
-Date: 02-08-2017
10 
->>>>>>> .r129550
4 
+Version: 1.3.1
5 
+Date: 06-05-2017
11 6 
 Author: Claudia Cava,
12 7 
     Isabella Castiglioni
13 8 
 Maintainer: Claudia Cava <claudia.cava@ibfm.cnr.it>
Browse code

gly metabolism fix2

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/StarBioTrek@129551 bc3139a8-67e5-0310-9ffc-ced21a209358

Claudia Cava authored on 12/05/2017 13:57:42
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1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
+<<<<<<< .mine
5 
+Version: 1.2.1
6 
+Date: 05-12-2017
7 
+=======
4 8 
 Version: 1.3.0
5 9 
 Date: 02-08-2017
10 
+>>>>>>> .r129550
6 11 
 Author: Claudia Cava,
7 12 
     Isabella Castiglioni
8 13 
 Maintainer: Claudia Cava <claudia.cava@ibfm.cnr.it>
... ... 
@@ -37,4 +42,4 @@ VignetteBuilder: knitr
37 42 
 LazyData: true
38 43 
 URL: https://github.com/claudiacava/StarBioTrek
39 44 
 BugReports: https://github.com/claudiacava/StarBioTrek/issues
40 
-RoxygenNote: 5.0.1
41 45 
\ No newline at end of file
46 
+RoxygenNote: 6.0.1
Browse code

bump x.y.z versions to odd y after creation of 3_5 branch

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/StarBioTrek@129129 bc3139a8-67e5-0310-9ffc-ced21a209358

Herve Pages authored on 24/04/2017 19:50:57
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DESCRIPTION
History View file @ 65b6eff
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@@ -1,7 +1,7 @@
1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.2.0
4 
+Version: 1.3.0
5 5 
 Date: 02-08-2017
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

bump x.y.z versions to even y prior to creation of 3_5 branch

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/StarBioTrek@129126 bc3139a8-67e5-0310-9ffc-ced21a209358

Herve Pages authored on 24/04/2017 19:25:24
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History View file @ 0ed4df8
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@@ -1,7 +1,7 @@
1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.1.3
4 
+Version: 1.2.0
5 5 
 Date: 02-08-2017
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

pathnet_fix2

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/StarBioTrek@126628 bc3139a8-67e5-0310-9ffc-ced21a209358

Claudia Cava authored on 09/02/2017 09:30:53
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History View file @ a3e147e
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@@ -1,8 +1,8 @@
1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.1.2
5 
-Date: 01-17-2017
4 
+Version: 1.1.3
5 
+Date: 02-08-2017
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
8 8 
 Maintainer: Claudia Cava <claudia.cava@ibfm.cnr.it>
... ... 
@@ -15,7 +15,8 @@ Imports:
15 15 
 	AnnotationDbi,
16 16 
 	e1071,
17 17 
 	ROCR,
18 
-	grDevices
18 
+	grDevices,
19 
+	igraph
19 20 
 Description: This tool StarBioTrek presents some methodologies to measure pathway activity and cross-talk among pathways integrating also the information of network data.
20 21 
 License: GPL (>= 3)
21 22 
 biocViews: GeneRegulation,
Browse code

fix pathnet

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/StarBioTrek@125967 bc3139a8-67e5-0310-9ffc-ced21a209358

Claudia Cava authored on 17/01/2017 12:47:28
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History View file @ 4c30e89
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@@ -1,8 +1,8 @@
1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.1.1
5 
-Date: 12-12-2016
4 
+Version: 1.1.2
5 
+Date: 01-17-2017
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
8 8 
 Maintainer: Claudia Cava <claudia.cava@ibfm.cnr.it>
Browse code

fix2

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/StarBioTrek@125020 bc3139a8-67e5-0310-9ffc-ced21a209358

Claudia Cava authored on 12/12/2016 11:06:41
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History View file @ 2c7b01d
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@@ -1,8 +1,8 @@
1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.1.0
5 
-Date: 10-16-2016
4 
+Version: 1.1.1
5 
+Date: 12-12-2016
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
8 8 
 Maintainer: Claudia Cava <claudia.cava@ibfm.cnr.it>
Browse code

bump x.y.z versions to odd 'y' after creation of 3_4 branch

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/StarBioTrek@122712 bc3139a8-67e5-0310-9ffc-ced21a209358

Herve Pages authored on 17/10/2016 19:10:43
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History View file @ 9950d03
... ... 
@@ -1,7 +1,7 @@
1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 1.0.0
4 
+Version: 1.1.0
5 5 
 Date: 10-16-2016
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

bump x.y.z versions to even 'y' prior to creation of 3_4 branch

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/StarBioTrek@122710 bc3139a8-67e5-0310-9ffc-ced21a209358

Herve Pages authored on 17/10/2016 18:45:06
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History View file @ e73315e
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@@ -1,7 +1,7 @@
1 1 
 Package: StarBioTrek
2 2 
 Type: Package
3 3 
 Title: StarBioTrek
4 
-Version: 0.99.28
4 
+Version: 1.0.0
5 5 
 Date: 10-16-2016
6 6 
 Author: Claudia Cava,
7 7 
     Isabella Castiglioni
Browse code

replace name

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/StarBioTrek@122485 bc3139a8-67e5-0310-9ffc-ced21a209358

Claudia Cava authored on 16/10/2016 09:58:12
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History View file @ cec98ac
1 1 
new file mode 100644
... ... 
@@ -0,0 +1,39 @@
1 
+Package: StarBioTrek
2 
+Type: Package
3 
+Title: StarBioTrek
4 
+Version: 0.99.28
5 
+Date: 10-16-2016
6 
+Author: Claudia Cava,
7 
+    Isabella Castiglioni
8 
+Maintainer: Claudia Cava <claudia.cava@ibfm.cnr.it>
9 
+Depends:
10 
+    R (>= 3.3)
11 
+Imports:
12 
+    SpidermiR,
13 
+	KEGGREST,
14 
+	org.Hs.eg.db,
15 
+	AnnotationDbi,
16 
+	e1071,
17 
+	ROCR,
18 
+	grDevices
19 
+Description: This tool StarBioTrek presents some methodologies to measure pathway activity and cross-talk among pathways integrating also the information of network data.
20 
+License: GPL (>= 3)
21 
+biocViews: GeneRegulation,
22 
+    Network,
23 
+	Pathways,
24 
+	KEGG
25 
+Suggests:
26 
+    BiocStyle,
27 
+    knitr,
28 
+    rmarkdown,
29 
+    testthat,
30 
+	devtools,
31 
+	roxygen2,
32 
+	qgraph,
33 
+	png,
34 
+	grid
35 
+VignetteBuilder: knitr
36 
+LazyData: true
37 
+URL: https://github.com/claudiacava/StarBioTrek
38 
+BugReports: https://github.com/claudiacava/StarBioTrek/issues
39 
+RoxygenNote: 5.0.1
0 40 
\ No newline at end of file
Browse code

replace name

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/StarBioTrek@122484 bc3139a8-67e5-0310-9ffc-ced21a209358

Claudia Cava authored on 16/10/2016 09:46:07
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History View file @ 6674f22
1 1 
deleted file mode 100644
... ... 
@@ -1,22 +0,0 @@
1 
-Package: StarBioTrek
2 
-Type: Package
3 
-Title: StarBioTrek
4 
-Version: 0.99.27
5 
-Date: 10-13-2016
6 
-Author: Claudia Cava, Isabella Castiglioni
7 
-Maintainer: Claudia Cava <claudia.cava@ibfm.cnr.it>
8 
-Depends: R (>= 3.3)
9 
-Imports: SpidermiR, KEGGREST, org.Hs.eg.db, AnnotationDbi, e1071, ROCR,
10 
-        grDevices
11 
-Description: This tool StarTrek presents some methodologies to measure
12 
-        pathway activity and cross-talk among pathways integrating also
13 
-        the information of network data.
14 
-License: GPL (>= 3)
15 
-biocViews: GeneRegulation, Network, Pathways, KEGG
16 
-Suggests: BiocStyle, knitr, rmarkdown, testthat, devtools, roxygen2,
17 
-        qgraph, png, grid
18 
-VignetteBuilder: knitr
19 
-LazyData: true
20 
-URL: https://github.com/claudiacava/StarTrek
21 
-BugReports: https://github.com/claudiacava/StarTrek/issues
22 
-RoxygenNote: 5.0.1
Browse code

rename StarTrek to StarBioTrek, add to manifest

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/StarBioTrek@122422 bc3139a8-67e5-0310-9ffc-ced21a209358

Martin Morgan authored on 14/10/2016 08:47:51
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History View file @ 4e947a8
1 1 
new file mode 100644
... ... 
@@ -0,0 +1,22 @@
1 
+Package: StarBioTrek
2 
+Type: Package
3 
+Title: StarBioTrek
4 
+Version: 0.99.27
5 
+Date: 10-13-2016
6 
+Author: Claudia Cava, Isabella Castiglioni
7 
+Maintainer: Claudia Cava <claudia.cava@ibfm.cnr.it>
8 
+Depends: R (>= 3.3)
9 
+Imports: SpidermiR, KEGGREST, org.Hs.eg.db, AnnotationDbi, e1071, ROCR,
10 
+        grDevices
11 
+Description: This tool StarTrek presents some methodologies to measure
12 
+        pathway activity and cross-talk among pathways integrating also
13 
+        the information of network data.
14 
+License: GPL (>= 3)
15 
+biocViews: GeneRegulation, Network, Pathways, KEGG
16 
+Suggests: BiocStyle, knitr, rmarkdown, testthat, devtools, roxygen2,
17 
+        qgraph, png, grid
18 
+VignetteBuilder: knitr
19 
+LazyData: true
20 
+URL: https://github.com/claudiacava/StarTrek
21 
+BugReports: https://github.com/claudiacava/StarTrek/issues
22 
+RoxygenNote: 5.0.1