Name Mode Size
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SpatialCPie.R 100644 32 kb
geom_scatterpie_interactive.R 100644 1 kb
utility.R 100644 1 kb
README.md
SpatialCPie =========== SpatialCPie is an R package designed to facilitate cluster evaluation for spatial transcriptomics data by providing intuitive visualizations that display the relationship between clusters in order to guide the user during cluster identification, selection and further downstream applications. Installation ------------ Using `devtools`, execute the following from the R console: ```r devtools::install_github( "jbergenstrahle/SpatialCPie" ,build_opts=c("--no-resave-data", "--no-manual") ) ``` Bioconductor version -------------------- SpatialCPie is currently on the developmental version of Bioconductor (3.9): https://bioconductor.org/packages/devel/bioc/html/SpatialCPie.html Usage ----- See the vignette: ```r vignette("SpatialCPie", package="SpatialCPie") ```