October 24, 2013
View8347d76

mark readAligned and other early functions 'legacy'

Martin Morgan authored on 24/10/2013 04:05:22
October 6, 2010
View168486b

The detail function and generic have moved to Biostrings.

Marc Carlson authored on 06/10/2010 20:27:30
September 14, 2008
View9434c3d

Fully deprecate basePath in favor of experimentPath Work on SRSet - readInd (class definition) readInds(undefined function call) replaced by readIndex - readIndex, readCount initialized to integer(0) so new("SRSet") creates valid objects - experimentPath method to directly access sourcePath - add implied sampleNames,ExperimentPath-method for non-RochePath ExperimentPath Misc code tidy

Martin Morgan authored on 14/09/2008 01:26:21
September 13, 2008
View8ba5f3b

Derive SolexaPath from ExperimentPath - allow for use of experimentPath rather than basePath, to avoid confusion between DNA 'base' and file system 'base' Additional code tidy - document ExperimentPath class - document additional methods - show,ExperimentPath and detail,ExperimentPath deal only with it's slot

Martin Morgan authored on 13/09/2008 15:11:44