October 14, 2013
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Creating branch for BioC 2.13 release.

Dan Tenenbaum authored on 14/10/2013 21:43:43
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bump versions prior to creating BioC 2.13 branch

Dan Tenenbaum authored on 14/10/2013 21:29:21
September 23, 2013
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code clean-up

Martin Morgan authored on 23/09/2013 18:52:54
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don't segfault when catching incomplete final lines

Martin Morgan authored on 23/09/2013 05:03:57
September 18, 2013
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FastqStreamer / Sampler improvements

Martin Morgan authored on 18/09/2013 19:10:25
September 13, 2013
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Use [ instead of deprecated seqselect().

Herve Pages authored on 13/09/2013 01:50:32
September 12, 2013
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Replace "[" method for GappedReads object with "extractROWS" method.

Herve Pages authored on 12/09/2013 23:33:26
July 17, 2013
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use cigarWidthAlongQuerySpace() instead of cigarWidthOnQuerySpace()

Herve Pages authored on 17/07/2013 18:52:53
July 2, 2013
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don't use deprecated cigarToQWidth

Martin Morgan authored on 02/07/2013 05:15:56
June 30, 2013
Viewda0c5cb

run QA on a sample from fastq files, by default

Martin Morgan authored on 30/06/2013 21:00:22
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make filter example a little more robust

Martin Morgan authored on 30/06/2013 20:56:11
June 1, 2013
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don't import unused keepSeqlevels

Martin Morgan authored on 01/06/2013 21:32:15
May 29, 2013
Viewc7132ba

add FastqSampler example to qa()

Martin Morgan authored on 29/05/2013 12:03:34
May 19, 2013
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quieten warnings from Snapshot

Martin Morgan authored on 19/05/2013 12:13:41
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DESCRIPTION and NEWS update

Martin Morgan authored on 19/05/2013 04:01:51