| Name | Mode | Size |
|---|---|---|
| .. | ||
| bcftools | 040000 | |
| examples | 040000 | |
| misc | 040000 | |
| win32 | 040000 | |
| AUTHORS | 100644 | 1 kb |
| COPYING | 100644 | 1 kb |
| ChangeLog.old | 100644 | 114 kb |
| INSTALL | 100644 | 1 kb |
| Makefile | 100644 | 3 kb |
| Makefile.mingw | 100644 | 2 kb |
| NEWS | 100644 | 28 kb |
| bam.c | 100644 | 16 kb |
| bam.h | 100644 | 25 kb |
| bam2bcf.c | 100644 | 14 kb |
| bam2bcf.h | 100644 | 2 kb |
| bam2bcf_indel.c | 100644 | 11 kb |
| bam2depth.c | 100644 | 6 kb |
| bam_aux.c | 100644 | 5 kb |
| bam_cat.c | 100644 | 5 kb |
| bam_color.c | 100644 | 3 kb |
| bam_endian.h | 100644 | 1 kb |
| bam_import.c | 100644 | 16 kb |
| bam_index.c | 100644 | 21 kb |
| bam_lpileup.c | 100644 | 5 kb |
| bam_mate.c | 100644 | 4 kb |
| bam_md.c | 100644 | 13 kb |
| bam_pileup.c | 100644 | 13 kb |
| bam_plcmd.c | 100755 | 22 kb |
| bam_reheader.c | 100644 | 1 kb |
| bam_rmdup.c | 100644 | 5 kb |
| bam_rmdupse.c | 100644 | 4 kb |
| bam_sort.c | 100644 | 18 kb |
| bam_stat.c | 100644 | 3 kb |
| bam_tview.c | 100644 | 11 kb |
| bam_tview.h | 100644 | 2 kb |
| bam_tview_curses.c | 100644 | 8 kb |
| bam_tview_html.c | 100644 | 8 kb |
| bamshuf.c | 100644 | 4 kb |
| bamtk.c | 100644 | 5 kb |
| bedcov.c | 100644 | 3 kb |
| bedidx.c | 100644 | 4 kb |
| bgzf.c | 100644 | 21 kb |
| bgzf.h | 100644 | 6 kb |
| bgzip.c | 100644 | 6 kb |
| chk_indel.c | 100644 | 2 kb |
| cut_target.c | 100644 | 6 kb |
| errmod.c | 100644 | 3 kb |
| errmod.h | 100644 | 0 kb |
| faidx.c | 100644 | 11 kb |
| faidx.h | 100644 | 3 kb |
| install.libs.R | 100755 | 0 kb |
| kaln.c | 100644 | 15 kb |
| kaln.h | 100644 | 2 kb |
| khash.h | 100644 | 17 kb |
| klist.h | 100644 | 3 kb |
| knetfile.c | 100644 | 18 kb |
| knetfile.h | 100644 | 2 kb |
| kprobaln.c | 100644 | 10 kb |
| kprobaln.h | 100644 | 2 kb |
| kseq.h | 100644 | 9 kb |
| ksort.h | 100644 | 10 kb |
| kstring.c | 100644 | 5 kb |
| kstring.h | 100644 | 4 kb |
| padding.c | 100644 | 17 kb |
| phase.c | 100644 | 20 kb |
| razf.c | 100644 | 24 kb |
| razf.h | 100644 | 4 kb |
| razip.c | 100644 | 4 kb |
| sam.c | 100644 | 6 kb |
| sam.h | 100644 | 3 kb |
| sam_header.c | 100644 | 21 kb |
| sam_header.h | 100644 | 2 kb |
| sam_view.c | 100644 | 15 kb |
| sample.c | 100644 | 3 kb |
| sample.h | 100644 | 0 kb |
| samtools.1 | 100644 | 28 kb |