Name Mode Size
..
SGFeatureCounts.Rd 100644 1 kb
SGFeatures.Rd 100644 2 kb
SGSegments.Rd 100644 0 kb
SGVariantCounts.Rd 100644 1 kb
SGVariants.Rd 100644 3 kb
TxFeatures.Rd 100644 1 kb
analyzeFeatures.Rd 100644 4 kb
analyzeVariants.Rd 100644 2 kb
annotate.Rd 100644 1 kb
annotateSGVariants.Rd 100644 2 kb
assays.Rd 100644 2 kb
convertToSGFeatures.Rd 100644 2 kb
convertToTxFeatures.Rd 100644 1 kb
exonCompatible.Rd 100644 1 kb
exportFeatures.Rd 100644 1 kb
filterFeatures.Rd 100644 2 kb
findOverlapsRanges.Rd 100644 1 kb
findSGVariants.Rd 100644 1 kb
getBamInfo.Rd 100644 2 kb
getSGFeatureCounts.Rd 100644 1 kb
getSGFeatureCountsPerSample.Rd 100644 1 kb
getSGVariantCounts.Rd 100644 2 kb
gr.Rd 100644 0 kb
importTranscripts.Rd 100644 1 kb
junctionCompatible.Rd 100644 1 kb
makeSGFeatureCounts.Rd 100644 1 kb
makeVariantNames.Rd 100644 1 kb
mergeTxFeatures.Rd 100644 1 kb
plotCoverage.Rd 100644 3 kb
plotFeatures.Rd 100644 3 kb
plotSpliceGraph.Rd 100644 5 kb
plotVariants.Rd 100644 2 kb
predictCandidatesInternal.Rd 100644 1 kb
predictCandidatesTerminal.Rd 100644 1 kb
predictExonsInternal.Rd 100644 1 kb
predictExonsTerminal.Rd 100644 2 kb
predictJunctions.Rd 100644 1 kb
predictSpliced.Rd 100644 2 kb
predictTxFeatures.Rd 100644 3 kb
predictTxFeaturesPerSample.Rd 100644 5 kb
predictTxFeaturesPerStrand.Rd 100644 2 kb
predictVariantEffects.Rd 100644 2 kb
processTerminalExons.Rd 100644 2 kb
removeExonsIsolated.Rd 100644 0 kb
sgf_ann.Rd 100644 0 kb
sgf_pred.Rd 100644 0 kb
sgfc_ann.Rd 100644 0 kb
sgfc_pred.Rd 100644 0 kb
sgv_ann.Rd 100644 0 kb
sgv_pred.Rd 100644 0 kb
sgvc_ann.Rd 100644 0 kb
sgvc_ann_from_bam.Rd 100644 0 kb
sgvc_pred.Rd 100644 0 kb
sgvc_pred_from_bam.Rd 100644 0 kb
si.Rd 100644 0 kb
slots.Rd 100644 10 kb
splicesiteOverlap.Rd 100644 1 kb
tx.Rd 100644 0 kb
txf_ann.Rd 100644 0 kb
txf_pred.Rd 100644 0 kb
updateObject.Rd 100644 1 kb