Package: SCArray
Type: Package
Title: Large-scale single-cell RNA-seq data manipulation with GDS files
Version: 1.11.0
Date: 2023-07-07
Depends: R (>= 3.5.0), gdsfmt (>= 1.36.0), methods, DelayedArray (>= 0.27.2)
Imports: S4Vectors, utils, Matrix, BiocParallel, DelayedMatrixStats,
        SummarizedExperiment, SingleCellExperiment, BiocSingular
Suggests: BiocGenerics, scater, scuttle, uwot, RUnit, knitr, markdown,
        rmarkdown, rhdf5, HDF5Array
Authors@R: c(person("Xiuwen", "Zheng", role=c("aut", "cre"),
Description: Provides large-scale single-cell RNA-seq data manipulation using
        Genomic Data Structure (GDS) files. It combines dense and sparse
        matrices stored in GDS files and the Bioconductor infrastructure
        framework (SingleCellExperiment and DelayedArray) to provide
        out-of-memory data storage and large-scale manipulation using the R
        programming language.
License: GPL-3
VignetteBuilder: knitr
ByteCompile: TRUE
biocViews: Infrastructure, DataRepresentation, DataImport, SingleCell, RNASeq