# Generated by roxygen2: do not edit by hand

export(createDistMat)
export(plotComplexRoc)
export(plotDiffTpcaVolcano)
export(plotPPiProfiles)
export(plotPPiRoc)
export(plotTpcaVolcano)
export(runDiffTPCA)
export(runTPCA)
exportClasses(tpcaResult)
exportMethods(CommonFeatures)
exportMethods(ComplexAnnotation)
exportMethods(ComplexBackgroundDistributionList)
exportMethods(ComplexRocTable)
exportMethods(ContrastCondName)
exportMethods(ContrastDistMat)
exportMethods(ContrastList)
exportMethods(CtrlCondName)
exportMethods(DistMat)
exportMethods(DistMethod)
exportMethods(ObjList)
exportMethods(PPiAnnotation)
exportMethods(PPiRocTable)
exportMethods(PPiRocTableAnno)
exportMethods(SetCommonFeatures)
exportMethods(SetComplexAnnotation)
exportMethods(SetComplexBackgroundDistributionList)
exportMethods(SetComplexRocTable)
exportMethods(SetContrastCondName)
exportMethods(SetContrastDistMat)
exportMethods(SetCtrlCondName)
exportMethods(SetDiffTpcaResultTable)
exportMethods(SetDistMat)
exportMethods(SetDistMethod)
exportMethods(SetPPiRocTable)
exportMethods(SetPPiRocTableAnno)
exportMethods(SetSummaryMethod)
exportMethods(SetTpcaResultTable)
exportMethods(SummaryMethod)
exportMethods(diffTpcaResultTable)
exportMethods(tpcaResultTable)
import(dplyr)
import(ggplot2)
import(tidyr)
importFrom(Biobase,ExpressionSet)
importFrom(Biobase,exprs)
importFrom(dplyr,filter)
importFrom(dplyr,one_of)
importFrom(dplyr,select)
importFrom(fdrtool,fdrtool)
importFrom(methods,new)
importFrom(pROC,auc)
importFrom(splines,ns)
importFrom(stats,dist)
importFrom(stats,median)
importFrom(stats,na.omit)
importFrom(stats,p.adjust)
importFrom(utils,head)
importFrom(utils,tail)