1. Rgraphviz
  2. Commit e0e2b6dcd1cc09b14d150889a83780c978e1cc37
Browse code

Commit made by the Bioconductor Git-SVN bridge. Consists of 2 commit(s).

Commit information:

Commit id: 40e7aa54c0a3970d7183b38b439456e717691670
Commit message:
Fixed issue with Rgraphviz on Ubuntu 12.04 uncovered by the agressive compiler settings used on this platform
Committed by Kasper Daniel Hansen <kasperdanielhansen at gmail.com>
Commit date: 2014-04-29T11:07:51-04:00

Commit id: 64183ff598f2f9c5c4561892d167007c638fe4ce
Commit message:
Merge branch 'master' of github.com:kasperdanielhansen/Rgraphviz
Committed by Kasper Daniel Hansen <kasperdanielhansen at gmail.com>
Commit date: 2014-04-29T11:07:59-04:00

From: Bioconductor Git-SVN Bridge <bioc-sync@bioconductor.org>

git-svn-id: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/Rgraphviz@89633 bc3139a8-67e5-0310-9ffc-ced21a209358

khansen authored on 29/04/2014 15:08:12
Showing3 changed files
DESCRIPTION
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@@ -2,7 +2,7 @@ Package: Rgraphviz
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 Title: Provides plotting capabilities for R graph objects
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 Description: Interfaces R with the AT and T graphviz library for
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         plotting R graph objects from the graph package.
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-Version: 2.9.0
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+Version: 2.9.1
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 Authors@R: c(person(c("Kasper", "Daniel"), "Hansen", role = c("cre", "aut"),
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                     email = "kasperdanielhansen@gmail.com"),
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              person("Jeff", "Gentry", role = "aut"),
inst/NEWS.Rd
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@@ -2,6 +2,17 @@
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 \title{Rgraphviz News}
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 \encoding{UTF-8}
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+\section{Version 2.9.x}{
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+  \itemize{
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+    \item Fixed a bug in the C code of Graphviz which manifests itself
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+    when the following options are given to GCC
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+    "-Wformat -Wformat-security -Werror=format-security -D_FORTIFY_SOURCE=2",
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+    this is the case for Ubuntu 12.04.
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+    Reported by Vladimir Zhurov <vzhurov2@uwo.ca>, Venkat Seshan
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+    <veseshan@gmail.com> and Chong Tang <tangc3@unr.edu>.
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+  }
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+}
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+
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 \section{Version 2.7.x}{
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   \itemize{
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     \item Fixed include statements in Graphviz code.
src/graphviz/lib/ortho/ortho.c
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@@ -1520,7 +1520,7 @@ emitGraph (FILE* fp, maze* mp, int n_edges, route* route_list, epair_t es[])
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     absbb.LL.x = absbb.LL.y = MAXDOUBLE;
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     absbb.UR.x = absbb.UR.y = -MAXDOUBLE;
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-    fprintf (fp, prolog2);
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+    fprintf (fp, "%s", prolog2);
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     fprintf (fp, "%d %d translate\n", TRANS, TRANS);
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     fputs ("0 0 1 setrgbcolor\n", fp);