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@@ -2,7 +2,7 @@ Package: Rgraphviz |
| 2 | 2 |
Title: Provides plotting capabilities for R graph objects |
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Description: Interfaces R with the AT and T graphviz library for |
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plotting R graph objects from the graph package. |
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-Version: 2.13.0 |
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+Version: 2.13.1 |
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Authors@R: c(person(c("Kasper", "Daniel"), "Hansen", role = c("cre", "aut"),
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email = "kasperdanielhansen@gmail.com"), |
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person("Jeff", "Gentry", role = "aut"),
|
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@@ -21,7 +21,11 @@ Imports: stats4, |
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grDevices |
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Suggests: RUnit, |
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BiocGenerics, |
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+ knitr, |
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+ rmarkdown, |
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+ BiocStyle, |
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| 24 | 27 |
XML |
| 28 |
+VignetteBuilder: knitr |
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| 25 | 29 |
SystemRequirements: optionally Graphviz (>= 2.16) |
| 26 | 30 |
GraphvizDetails: Graphviz 2.28.0 |
| 27 | 31 |
License: EPL |
| ... | ... |
@@ -42,3 +46,4 @@ Collate: AllGenerics.R |
| 42 | 46 |
writers.R |
| 43 | 47 |
zzz.R |
| 44 | 48 |
biocViews: GraphAndNetwork, Visualization |
| 49 |
+URL: https://github.com/kasperdanielhansen/Rgraphviz |
| 45 | 50 |
new file mode 100644 |
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@@ -0,0 +1,48 @@ |
| 1 |
+--- |
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| 2 |
+title: "Test plots for Rgraphviz" |
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| 3 |
+author: "Kasper D. Hansen" |
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| 4 |
+date: "`r doc_date()`" |
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+package: "`r pkg_ver('BiocStyle')`"
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+abstract: > |
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+ Test |
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+vignette: > |
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+ %\VignetteIndexEntry{Bioconductor style for HTML documents}
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+ %\VignetteEngine{knitr::rmarkdown}
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+ %\VignetteEncoding{UTF-8}
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+output: |
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+ BiocStyle::html_document |
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+--- |
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+ |
|
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+# Introduction |
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+ |
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+This vignette is intended for testing purposes for the `r Biocpkg("Rgraphviz")` package. Unfortunately, we still do not have a great way to test graphics output.
|
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| 19 |
+ |
|
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+```{r library}
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+library(Rgraphviz) |
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| 22 |
+``` |
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+ |
|
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+# Test cases |
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+ |
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+## Example 1 |
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| 27 |
+ |
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+```{r graph1}
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| 29 |
+set.seed(123) |
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| 30 |
+V <- letters[1:10] |
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| 31 |
+M <- 1:4 |
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| 32 |
+g1 <- randomGraph(V, M, 0.2) |
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| 33 |
+``` |
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+ |
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+```{r plo1,plot=TRUE}
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+nodes(g1) <- paste0(nodes(g1), "\nX") |
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+plot(g1) |
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+``` |
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+ |
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+ |
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+# Session info |
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+ |
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+Here is the output of `sessionInfo()` on the system on which this |
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+document was compiled: |
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+ |
|
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+```{r sessionInfo, echo=FALSE}
|
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| 47 |
+sessionInfo() |
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| 48 |
+``` |
