# ReactomePA: Reactome Pathway Analysis
[](http://www.repostatus.org/#active)
[](https://codecov.io/gh/GuangchuangYu/ReactomePA/)
[](https://www.bioconductor.org/packages/ReactomePA)
[](https://github.com/guangchuangyu/ReactomePA)
[](https://www.bioconductor.org/packages/devel/bioc/html/clusterProfiler.html#since)
[](https://www.bioconductor.org/packages/devel/bioc/html/ReactomePA.html#archives)
[](https://github.com/GuangchuangYu/ReactomePA/commits/master)
[](https://bioconductor.org/checkResults/devel/bioc-LATEST/ReactomePA/)
[](https://travis-ci.org/GuangchuangYu/ReactomePA)
[](https://ci.appveyor.com/project/GuangchuangYu/ReactomePA)
This package provides functions for pathway analysis based on REACTOME
pathway database. It implements enrichment analysis, gene set enrichment
analysis and several functions for visualization. This package is not
affiliated with the Reactome team.
For details, please visit
<https://yulab-smu.top/biomedical-knowledge-mining-book/>.
## :writing_hand: Authors
Guangchuang YU
School of Basic Medical Sciences, Southern Medical University
<https://yulab-smu.top>
[](https://twitter.com/intent/tweet?hashtags=ReactomePA&url=http://pubs.rsc.org/en/Content/ArticleLanding/2016/MB/C5MB00663E#!divAbstract)
[](https://saythanks.io/to/GuangchuangYu)
[](https://guangchuangyu.github.io/blog_images/biobabble.jpg)
------------------------------------------------------------------------
Please cite the following article when using `ReactomePA`:
***G Yu***, QY He<sup>\*</sup>. ReactomePA: an R/Bioconductor package
for reactome pathway analysis and visualization. ***Molecular
BioSystems*** 2016, 12(2):477-479.
[](https://doi.org/10.1039/c5mb00663e)
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