exportPattern("^[[:alpha:]]+") import(tools) import(BiocGenerics) import(S4Vectors) import(IRanges) import(GenomeInfoDb) import(GenomicRanges) import(VariantAnnotation) import(googleVis) import(gtools) import(BSgenome.Hsapiens.UCSC.hg19) import(TxDb.Hsapiens.UCSC.hg19.knownGene) import(phastCons100way.UCSC.hg19) import(GenomicFeatures) importFrom("GenomicScores", "scores") importFrom("SummarizedExperiment", "rowRanges") importFrom("grDevices", "dev.off", "png") importFrom("graphics", "abline", "lines", "plot", "points") importFrom("utils", "read.delim", "read.table", "write.table")