import(methods) importFrom(MASS, negative.binomial) importClassesFrom(EDASeq, SeqExpressionSet) importFrom(EDASeq, normCounts, newSeqExpressionSet) importFrom(Biobase, pData) importClassesFrom(edgeR, DGEGLM) S3method(residuals, DGEGLM) exportMethods(RUVg, RUVs, RUVr) export(makeGroups)