Package: RUVSeq Version: 1.37.0 Title: Remove Unwanted Variation from RNA-Seq Data Description: This package implements the remove unwanted variation (RUV) methods of Risso et al. (2014) for the normalization of RNA-Seq read counts between samples. Authors@R: c(person("Davide", "Risso", email = "risso.davide@gmail.com", role = c("aut", "cre", "cph")), person("Sandrine", "Dudoit", role = "aut"), person("Lorena", "Pantano", role = "ctb"), person("Kamil", "Slowikowski", role = "ctb")) Author: Davide Risso [aut, cre, cph], Sandrine Dudoit [aut], Lorena Pantano [ctb], Kamil Slowikowski [ctb] Maintainer: Davide Risso <risso.davide@gmail.com> Date: 04-15-2014 Imports: methods, MASS Depends: Biobase, EDASeq (>= 1.99.1), edgeR Suggests: BiocStyle, knitr, RColorBrewer, zebrafishRNASeq, DESeq2 VignetteBuilder: knitr License: Artistic-2.0 LazyLoad: yes biocViews: ImmunoOncology, DifferentialExpression, Preprocessing, RNASeq, Software URL: https://github.com/drisso/RUVSeq BugReports: https://github.com/drisso/RUVSeq/issues RoxygenNote: 6.0.1