Graph ofRNAmodR
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  • c2d06da (HEAD -> master, origin/master, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:20:02 -0400;
  • 6cf3f83 (origin/RELEASE_3_16, RELEASE_3_16) bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:20:02 -0400;
  • 44f8760 bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:56:38 +0000;
  • ad86538 (origin/RELEASE_3_15, RELEASE_3_15) bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:56:38 +0000;
  • 8cd7f03 Get RNAmodR ready for the switch to virtual DataFrame (in S4Vectors package) by Hervé Pagès <hpages.on.github@gmail.com> 2021-11-04 18:34:40 -0700;
  • 67efd66 bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:52:29 +0000;
  • 33b6760 (origin/RELEASE_3_14, RELEASE_3_14) bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:52:29 +0000;
  • 114a9f8 bugfix by FelixErnst <felix.gm.ernst@outlook.com> 2021-08-25 21:23:14 +0200;
  • 9018aee internal bugfix for "length > 1 in coercion to logical" by FelixErnst <felix.gm.ernst@outlook.com> 2021-07-27 21:21:18 +0200;
  • 7036ba9 bump x.y.z version to odd y following creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:44:18 +0000;
  • c7b25bf (origin/RELEASE_3_13, RELEASE_3_13) bump x.y.z version to even y prior to creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:44:18 +0000;
  • 27775eb improvement of recent bugfix for extractROWS and added additional test by Felix Ernst <felix.gm.ernst@outlook.com> 2021-04-23 12:29:38 +0200;
  • 57f0369 bugfix for extractROWS by Felix Ernst <felix.gm.ernst@outlook.com> 2021-04-19 16:27:52 +0200;
  • 2706c9a plot type points added by FelixErnst <felix.gm.ernst@outlook.com> 2021-01-23 17:49:53 +0100;
  • bcc8a5c bugfixes plotting by FelixErnst <felix.gm.ernst@outlook.com> 2021-01-12 20:50:03 +0100;
  • 513f1ca bugfix by FelixErnst <felix.gm.ernst@outlook.com> 2021-01-12 19:14:49 +0100;
  • f30cb3b bugfixes by FelixErnst <felix.gm.ernst@outlook.com> 2021-01-12 16:58:00 +0100;
  • 5a3c65f updated check-bioc.yml by FelixErnst <felix.gm.ernst@outlook.com> 2020-12-15 23:55:28 +0100;
  • 2f150c0 Update check-bioc.yml by FelixErnst <felix.gm.ernst@outlook.com> 2020-12-13 17:22:17 +0100;
  • 11713f5 Update check-bioc.yml by FelixErnst <felix.gm.ernst@outlook.com> 2020-12-13 15:57:02 +0100;
  • ee3f7a8 Update check-bioc.yml by FelixErnst <felix.gm.ernst@outlook.com> 2020-12-13 13:06:35 +0100;
  • 3a40239 Update check-bioc.yml by FelixErnst <felix.gm.ernst@outlook.com> 2020-12-13 13:03:38 +0100;
  • a77c608 Update check-bioc.yml by FelixErnst <felix.gm.ernst@outlook.com> 2020-12-13 12:14:04 +0100;
  • facd587 (origin/RELEASE_3_12, RELEASE_3_12) bugfix for names plotted by plotCompareByCoord by FelixErnst <felix.gm.ernst@outlook.com> 2020-12-12 22:58:02 +0100;
  • 33cc35c bugfix for names plotted by plotCompareByCoord by FelixErnst <felix.gm.ernst@outlook.com> 2020-12-12 22:50:30 +0100;
  • accee11 updated GHA by FelixErnst <felix.gm.ernst@outlook.com> 2020-12-09 19:30:29 +0100;
  • e9cac5a updated R version dependency in DESCRIPTION by FelixErnst <felix.gm.ernst@outlook.com> 2020-12-09 18:48:35 +0100;
  • a127a39 updated R version dependency in DESCRUPTION by FelixErnst <felix.gm.ernst@outlook.com> 2020-12-09 18:47:21 +0100;
  • 97e9388 bump x.y.z version to odd y following creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 11:46:53 -0400;
  • 8c036e9 bump x.y.z version to even y prior to creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 11:46:53 -0400;
  • 52ae440 bugfix for GRangesList as annotation data by FelixErnst <felix.gm.ernst@outlook.com> 2020-08-30 13:18:23 +0200;
  • c0299cf (origin/RELEASE_3_11, RELEASE_3_11) bugfix for GRangesList as annotation data by FelixErnst <felix.gm.ernst@outlook.com> 2020-08-30 13:11:07 +0200;
  • b785a3e Update DESCRIPTION by FelixErnst <felix.gm.ernst@outlook.com> 2020-08-01 16:51:02 +0200;
  • d7eba8d reworked code dependent on assertive package by FelixErnst <felix.gm.ernst@outlook.com> 2020-08-01 16:32:59 +0200;
  • bca8814 fixed vignette error on windows by FelixErnst <felix.gm.ernst@outlook.com> 2020-07-19 13:39:22 +0200;
  • 0b8e1b1 fixed test due to change error message by FelixErnst <felix.gm.ernst@outlook.com> 2020-07-18 10:31:01 +0200;
  • c3cad70 reworked dependent on assertive package by FelixErnst <felix.gm.ernst@outlook.com> 2020-07-18 10:13:55 +0200;
  • 6b637bb Update .Rbuildignore by FelixErnst <felix.gm.ernst@outlook.com> 2020-07-17 22:45:16 +0200;
  • 4ccec29 updated NAMESPACE, DESCRIPTION and added pre-install for dependency by FelixErnst <felix.gm.ernst@outlook.com> 2020-07-17 22:33:53 +0200;
  • a677464 changed the cache restore-keys for GHA by FelixErnst <felix.gm.ernst@outlook.com> 2020-07-17 21:29:44 +0200;
  • 5820843 Update pkgdown.yaml by FelixErnst <felix.gm.ernst@outlook.com> 2020-07-17 06:48:05 +0200;
  • cb41f00 added ask=FALSE to BiocManager::install call by FelixErnst <felix.gm.ernst@outlook.com> 2020-07-17 06:47:22 +0200;
  • fc5a163 change to Bioc devel for testing by FelixErnst <felix.gm.ernst@outlook.com> 2020-07-17 06:42:57 +0200;
  • 79d102a Merge branch 'master' of git.bioconductor.org:packages/RNAmodR by FelixErnst <felix.gm.ernst@outlook.com> 2020-07-17 06:41:01 +0200;
  • 72ddfd3 added libcurl4 install as dependency for Rhtslib by FelixErnst <felix.gm.ernst@outlook.com> 2020-07-04 12:16:32 +0200;
  • 9f4f959 fixed install order of dependencies because they are not resolved correctly by FelixErnst <felix.gm.ernst@outlook.com> 2020-07-04 10:11:27 +0200;
  • de67894 added GHA for pkgdown by FelixErnst <felix.gm.ernst@outlook.com> 2020-07-04 10:01:09 +0200;
  • 3d136bc updated GHA by FelixErnst <felix.gm.ernst@outlook.com> 2020-07-04 09:59:41 +0200;
  • fcc95e5 resync with S4Vectors 0.27.12 by Hervé Pagès <hpages@fredhutch.org> 2020-06-08 17:55:15 -0700;
  • 66a4c62 Internal helper make_rownames_for_DataTable_display() was renamed make_rownames_for_RectangularData_display() in S4Vectors 0.27.5. by Hervé Pagès <hpages@fredhutch.org> 2020-05-04 21:25:26 -0700;
  • 3067e0e version bump and NEWS update by FelixErnst <felix.gm.ernst@outlook.com> 2020-04-29 12:20:08 +0200;
  • ce983c1 Merge branch 'stats' into RELEASE_3_11 by FelixErnst <felix.gm.ernst@outlook.com> 2020-04-29 12:19:22 +0200;
  • 40c3015 version bump and NEWS update by FelixErnst <felix.gm.ernst@outlook.com> 2020-04-29 12:17:43 +0200;
  • a1087b6 Merge pull request <a href="#27">#27</a> from FelixErnst/stats by Felix Ernst <felix.gm.ernst@outlook.com> 2020-04-29 12:15:56 +0200;
  • 5bf0285 bump x.y.z version to odd y following creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 19:27:55 +0000;
  • aea00e3 bump x.y.z version to even y prior to creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 19:27:55 +0000;
  • c73de5b Update DESCRIPTION by FelixErnst <felix.gm.ernst@outlook.com> 2020-04-27 20:52:53 +0200;
  • e9a32d6 Update R-CMD-check.yaml by FelixErnst <felix.gm.ernst@outlook.com> 2020-04-27 20:01:56 +0200;
  • b9a5a3d Update R-CMD-check.yaml by FelixErnst <felix.gm.ernst@outlook.com> 2020-04-27 19:51:14 +0200;
  • 873ecf6 Update R-CMD-check.yaml by FelixErnst <felix.gm.ernst@outlook.com> 2020-04-27 19:37:25 +0200;
  • 5dfc7d6 Update R-CMD-check.yaml by FelixErnst <felix.gm.ernst@outlook.com> 2020-04-27 19:23:30 +0200;
  • b8055b9 Update R-CMD-check.yaml by FelixErnst <felix.gm.ernst@outlook.com> 2020-04-27 19:14:21 +0200;
  • 32f039b Update R-CMD-check.yaml by FelixErnst <felix.gm.ernst@outlook.com> 2020-04-26 21:48:43 +0200;
  • 470ffcb added libcurl4-gnutls-dev to CI config by FelixErnst <felix.gm.ernst@outlook.com> 2020-04-26 21:45:08 +0200;
  • a8f33ec Update R-CMD-check.yaml by FelixErnst <felix.gm.ernst@outlook.com> 2020-04-26 21:38:19 +0200;
  • f60e78e Update R-CMD-check.yaml by FelixErnst <felix.gm.ernst@outlook.com> 2020-04-26 21:05:39 +0200;
  • 947e3e0 Update R-CMD-check.yaml by FelixErnst <felix.gm.ernst@outlook.com> 2020-04-26 21:01:31 +0200;
  • ba0d49b Update README.md by FelixErnst <felix.gm.ernst@outlook.com> 2020-04-26 20:53:07 +0200;
  • c8d6a91 reenabled travis CI by FelixErnst <felix.gm.ernst@outlook.com> 2020-04-26 20:49:02 +0200;
  • c16f62a Update R-CMD-check.yaml by FelixErnst <felix.gm.ernst@outlook.com> 2020-04-26 20:37:02 +0200;
  • 107ab54 Update R-CMD-check.yaml by FelixErnst <felix.gm.ernst@outlook.com> 2020-04-26 20:28:17 +0200;
  • f206ab6 Update R-CMD-check.yaml by FelixErnst <felix.gm.ernst@outlook.com> 2020-04-26 20:27:42 +0200;
  • 46a5f5c switched from travis to GitHub Actions by FelixErnst <felix.gm.ernst@outlook.com> 2020-04-26 20:26:19 +0200;
  • 659d2e0 added stats function by FelixErnst <felix.gm.ernst@outlook.com> 2020-04-26 20:11:08 +0200;
  • f20b77b Fix bindROWS() methods for SequenceData and SequenceDataFrame objects by Hervé Pagès <hpages@fredhutch.org> 2020-03-24 23:40:01 -0700;
  • 7379edc parallelSlotNames() was renamed vertical_slot_names() in S4Vectors 0.25.14 by Hervé Pagès <hpages@fredhutch.org> 2020-03-23 23:22:09 -0700;
  • 40435e0 Update Modifier-roc.R by FelixErnst <felix.gm.ernst@outlook.com> 2020-03-21 19:33:01 +0100;
  • 614fd40 Update RNAmodR.Rmd by FelixErnst <felix.gm.ernst@outlook.com> 2020-03-21 18:38:36 +0100;
  • 0d5e1bb fixed broken ROCR plot by circumventing the S4 method dispatch by FelixErnst <felix.gm.ernst@outlook.com> 2020-03-19 19:27:07 +0100;
  • 4f4dec1 disabled plotROC function due to S3 method dispatch issues with ROCR functions by FelixErnst <felix.gm.ernst@outlook.com> 2020-03-19 15:55:17 +0100;
  • 00cb323 added virtual class SequenceData to export by FelixErnst <felix.gm.ernst@outlook.com> 2020-03-16 12:19:57 +0100;
  • eed7f6e Updated vignette by Felix Ernst <felix.gm.ernst@outlook.com> 2020-03-05 13:13:00 +0100;
  • 5fe5129 Updated README.md by Felix Ernst <felix.gm.ernst@outlook.com> 2020-03-05 13:03:27 +0100;
  • 03fb49d fixed setting color to Gviz DataTrack by FelixErnst <felix.gm.ernst@outlook.com> 2020-02-29 00:27:52 +0100;
  • dc090c5 Update README.md by Felix Ernst <felix.gm.ernst@outlook.com> 2020-02-28 22:03:12 +0100;
  • c6d6320 Update README.md by Felix Ernst <felix.gm.ernst@outlook.com> 2020-02-28 22:01:35 +0100;
  • 69d25ca added pkgdown and gh-pages config by FelixErnst <felix.gm.ernst@outlook.com> 2020-02-28 18:09:14 +0100;
  • ba9abeb fixed man page for SequenceModRNAStringSetTrack/SequenceModDNAStringSetTrack by Felix Ernst <felix.gm.ernst@outlook.com> 2020-02-27 22:56:32 +0100;
  • e8cf425 refactored ModifiedSequenceTrack classes by Felix Ernst <felix.gm.ernst@outlook.com> 2020-02-23 13:45:46 +0100;
  • c3d5bfd Update Gviz-functions.R by FelixErnst <felix.gm.ernst@outlook.com> 2020-01-26 11:25:23 +0100;
  • 6121992 rmoved additional biovizBase calls by FelixErnst <felix.gm.ernst@outlook.com> 2020-01-26 11:22:19 +0100;
  • 93b92d9 Update NAMESPACE by FelixErnst <felix.gm.ernst@outlook.com> 2020-01-26 11:11:38 +0100;
  • 0897ddf removed dependencies for stringr, stringi and biovizBase by FelixErnst <felix.gm.ernst@outlook.com> 2020-01-26 11:03:59 +0100;
  • c9b15e9 version bump by FelixErnst <felix.gm.ernst@outlook.com> 2020-01-25 14:01:14 +0100;
  • 71d7aba fixed regression in options checking by FelixErnst <felix.gm.ernst@outlook.com> 2020-01-25 13:47:20 +0100;
  • 3479e61 fixed regression in options checking by FelixErnst <felix.gm.ernst@outlook.com> 2020-01-25 13:12:20 +0100;
  • faa85aa added additional check for options input by FelixErnst <felix.gm.ernst@outlook.com> 2020-01-25 12:57:45 +0100;
  • 1a65feb updated travis config by FelixErnst <felix.gm.ernst@outlook.com> 2020-01-21 09:02:16 +0100;
  • f48fce4 added travis config by FelixErnst <felix.gm.ernst@outlook.com> 2020-01-21 00:12:18 +0100;
  • 3086eaa clean up by Felix Ernst <felix.gm.ernst@outlook.com> 2020-01-18 22:39:03 +0100;