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Graph of RMassBank

3b61006 (HEAD -> devel, origin/master, origin/devel, origin/HEAD) Merge pull request <a href="#330">#330</a> from MassBank/dev by meowcat <Michael.Stravs@eawag.ch> 2023-05-04 11:51:53 +0200;
f7a79e8 Bump version for Bioc build by meowcat <Michael.Stravs@eawag.ch> 2023-05-03 18:03:27 +0200;
3a93a56 Merge pull request <a href="#329">#329</a> from MassBank/ci-bioc-317 by meowcat <Michael.Stravs@eawag.ch> 2023-05-03 14:43:39 +0200;
62b3599 Merge branch 'dev' into ci-bioc-317 by meowcat <Michael.Stravs@eawag.ch> 2023-05-03 13:22:56 +0200;
878239f Deactivating Win/Mac for the time being by meowcat <Michael.Stravs@eawag.ch> 2023-05-03 11:26:01 +0200;
f1e1b6f Trying CI with fixed-version Bioc 3.17 docker by meowcat <Michael.Stravs@eawag.ch> 2023-05-03 11:24:27 +0200;
1d441e7 Merge pull request <a href="#327">#327</a> from MassBank/326-intensities-in-scientific-notation-why by meowcat <Michael.Stravs@eawag.ch> 2023-05-03 11:05:19 +0200;
ec3f34f fixing accidental scientific notation printing) by Michele Stravs <stravsmi@eawag.ch> 2023-05-03 11:03:32 +0200;
564c5f5 cache@v3 by Michele Stravs <stravsmi@eawag.ch> 2023-04-27 11:19:02 +0200;
4e2a0d3 Fixed NAMESPACE; try to save cache before R cmd check by Michele Stravs <stravsmi@eawag.ch> 2023-04-27 11:17:23 +0200;
2bf5ef7 Fixing imports, /nocheck by Michele Stravs <stravsmi@eawag.ch> 2023-04-27 11:08:56 +0200;
4b1e57e More documentation fixes by Michele Stravs <stravsmi@eawag.ch> 2023-04-27 09:38:07 +0200;
96914d0 Skip Windows and Mac for now by Michele Stravs <stravsmi@eawag.ch> 2023-04-27 09:11:43 +0200;
f504d9e fix typo in problematicPeak example by Michele Stravs <stravsmi@eawag.ch> 2023-04-26 19:08:43 +0200;
c7d1559 Update check-bioc.yml /nocheck by meowcat <Michael.Stravs@eawag.ch> 2023-04-26 18:18:32 +0200;
3cc38e8 more doc fixes by Michele Stravs <stravsmi@eawag.ch> 2023-04-26 17:39:19 +0200;
6326b52 more documentation fixes by Michele Stravs <stravsmi@eawag.ch> 2023-04-26 17:35:01 +0200;
ed7aa23 fixing some NOTEs about unbound global variables by Michele Stravs <stravsmi@eawag.ch> 2023-04-26 17:01:13 +0200;
3db8775 Merge branch 'main' into dev by Michele Stravs <stravsmi@eawag.ch> 2023-04-26 11:55:53 +0200;
5eb6fc6 Merge remote-tracking branch 'bioc/master' by Michele Stravs <stravsmi@eawag.ch> 2023-04-26 11:54:17 +0200;
284d385 Fixing missing or outdated documentation by Michele Stravs <stravsmi@eawag.ch> 2023-04-26 09:57:32 +0200;
b64975c add some updated docfiles by Michele Stravs <stravsmi@eawag.ch> 2023-04-25 19:37:41 +0200;
8e38d3d Improving import specifications by Michele Stravs <stravsmi@eawag.ch> 2023-04-25 17:52:07 +0200;
200dc64 fixing outdated docs by Michele Stravs <stravsmi@eawag.ch> 2023-04-25 17:25:34 +0200;
7834013 fixed URLencode notes by Michele Stravs <stravsmi@eawag.ch> 2023-04-25 16:47:44 +0200;
d51a0c2 bump x.y.z version to odd y following creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 10:23:41 -0400;
60401ce (origin/RELEASE_3_17, RELEASE_3_17) bump x.y.z version to even y prior to creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 10:23:41 -0400;
505ba28 Merge pull request <a href="#323">#323</a> from jorainer/main by meowcat <Michael.Stravs@eawag.ch> 2023-04-25 16:16:16 +0200;
89a45b5 Allow [A-Za-z0-9] in contributor block, after discussing https://github.com/MassBank/MassBank-data/issues/84 by Michele Stravs <stravsmi@eawag.ch> 2023-04-25 16:14:09 +0200;
97197bb Merge branch 'main' into bioc-dev by Michele Stravs <stravsmi@eawag.ch> 2023-04-25 15:34:35 +0200;
f812711 ci: add GHA testing for BioC devel by jorainer <johannes.rainer@gmail.com> 2023-03-10 12:54:26 +0100;
8b416eb Merge pull request <a href="#320">#320</a> from MassBank/319-compound-ids-4-digits by Tobias Schulze <tobias.schulze@ufz.de> 2023-02-08 09:07:43 +0100;
c639645 allow >4 digits in compound list by Michele Stravs <stravsmi@eawag.ch> 2022-11-29 14:27:05 +0100;
b05aa95 bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:07:13 -0400;
919937f (origin/RELEASE_3_16, RELEASE_3_16) bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:07:13 -0400;
73f172e Allowing AUTHORS entries from infolists by Michele Stravs <stravsmi@eawag.ch> 2022-07-15 16:12:57 +0200;
ac0e583 Updated default settings by Michele Stravs <stravsmi@eawag.ch> 2022-06-30 10:38:28 +0200;
85c8a2f Implemented, documented and fixed more ACCESSION generator options by Michele Stravs <stravsmi@eawag.ch> 2022-06-29 16:45:51 +0200;
1c96631 New ACCESSION scheme and customizable ACCESSION building by Michele Stravs <stravsmi@eawag.ch> 2022-06-21 17:05:50 +0200;
2fa5677 (origin/RELEASE_3_15, RELEASE_3_15) Updated NEWS for backported fixes by Michele Stravs <stravsmi@eawag.ch> 2022-05-31 17:20:51 +0200;
5a06253 Fix issue when a FileList had no mode column, closes <a href="#309">#309</a> by Steffen Neumann <sneumann@ipb-halle.de> 2022-05-11 17:54:05 +0200;
4cdad37 Backported fix <a href="#310">#310</a> by Steffen Neumann <sneumann@ipb-halle.de> 2022-05-11 15:12:56 +0200;
ecbd935 Merge pull request <a href="#313">#313</a> from MassBank/fix/issue309 by Steffen Neumann <sneumann@ipb-halle.de> 2022-05-24 11:34:18 +0200;
b834ae4 Fix issue when a FileList had no mode column, closes <a href="#309">#309</a> by Steffen Neumann <sneumann@ipb-halle.de> 2022-05-11 17:54:05 +0200;
8825980 Remove getCompTox() because EPA AcTORWS web services have been retired by Steffen Neumann <sneumann@ipb-halle.de> 2022-05-11 15:12:56 +0200;
046da5f bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:11:41 +0000;
c5c56ac bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:11:41 +0000;
a39ac11 fixed missing data.table import by Michele Stravs <stravsmi@eawag.ch> 2022-04-01 09:16:47 +0200;
e1fd3b6 Bumped version by Michele Stravs <stravsmi@eawag.ch> 2022-03-29 15:16:08 +0200;
161cc76 Fix charges for water loss by Michele Stravs <stravsmi@eawag.ch> 2022-03-18 09:41:57 +0100;
7b780e2 Fixing mz calculation for multiply-charged ions and negative atoms by Michele Stravs <stravsmi@eawag.ch> 2022-03-17 11:12:16 +0100;
27128b5 Merge branch 'main' into dev (forward-port mzData fix), bump version by Michele Stravs <stravsmi@eawag.ch> 2022-03-10 14:58:05 +0100;
b896a8a Merge remote-tracking branch 'origin/nz-enhancements' into dev by Michele Stravs <stravsmi@eawag.ch> 2022-03-09 11:37:11 +0100;
01dae46 Bump version, remove stray file by Michele Stravs <stravsmi@eawag.ch> 2022-03-09 11:08:31 +0100;
72ae58f Merge commit '871fbdea7e44a4e611292da50e45dd2ea4b4a7c8' into dev by Michele Stravs <stravsmi@eawag.ch> 2022-03-09 10:54:26 +0100;
4ccb5d6 replaced do.typing by set.atom.types, fixing <a href="#303">#303</a> by Michele Stravs <stravsmi@eawag.ch> 2022-03-09 10:44:27 +0100;
df02127 Added acetate adduct by Michele Stravs <stravsmi@eawag.ch> 2022-03-08 15:19:47 +0100;
e51aa6f Switch to using mzML files in the vignette after mzR dropped support for mzData by Steffen Neumann <sneumann@ipb-halle.de> 2022-01-28 13:02:32 +0100;
871fbde Re-generated documentation with Roxygen by Paul Stahlhofen <paul.stahlhofen@uni-bielefeld.de> 2021-12-22 15:24:53 +0100;
850fc93 Fixed documentation of .updateObject.RmbSpectrum2.formulaSource by Paul Stahlhofen <paul.stahlhofen@uni-bielefeld.de> 2021-12-22 15:22:07 +0100;
697b325 Adjusted links in the documentation of RmbSpectrum2 by Paul Stahlhofen <paul.stahlhofen@uni-bielefeld.de> 2021-12-22 15:20:23 +0100;
4848405 Merge pull request <a href="#300">#300</a> from pstahlhofen/jcamp_parser by Tobias Schulze <tobias.schulze@ufz.de> 2021-12-22 09:29:19 +0100;
44deb36 Starting with BioC 3.15 + R 4.2, 32-bit Windows is no longer supported so Windows builds are single arch only (i.e. 64-bit only) by Hervé Pagès <hpages.on.github@gmail.com> 2021-12-16 13:33:16 -0800;
6d7afc5 Updated documentation, NAMESPACE and DESCRIPTION Added the following libraries to 'Imports': - ChemmineR - webchem - data.table - readJDX by Paul Stahlhofen <paul.stahlhofen@uni-bielefeld.de> 2021-12-15 21:30:15 +0100;
12d3a09 Added a script to create a Compoundlist from JCAMP-DX data by Paul Stahlhofen <paul.stahlhofen@uni-bielefeld.de> 2021-12-15 11:43:05 +0100;
5f229a5 Updated the documentation in the man and vignettes folder based on work from the previous commits by Paul Stahlhofen <paul.stahlhofen@uni-bielefeld.de> 2021-11-08 11:20:09 +0100;
3374b94 Completed documentation of `RmbSpectrum2` by Paul Stahlhofen <paul.stahlhofen@uni-bielefeld.de> 2021-11-01 20:06:15 +0100;
808be3f Started to document `RmbSpectrum2` by Paul Stahlhofen <paul.stahlhofen@uni-bielefeld.de> 2021-10-27 17:17:13 +0200;
aabc062 bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:04:06 +0000;
78bf126 (origin/RELEASE_3_14, RELEASE_3_14) bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:04:06 +0000;
be73ffd Added documentation for 'property' get and set-methods by Paul Stahlhofen <paul.stahlhofen@uni-bielefeld.de> 2021-10-14 12:06:58 +0200;
00101b7 Added documentation for methods 'mergePeaks' and 'mergeSpectra' by Paul Stahlhofen <paul.stahlhofen@uni-bielefeld.de> 2021-10-05 16:34:12 +0200;
96aaae4 Added documentation for findMsMsHRperMsp by Paul Stahlhofen <paul.stahlhofen@uni-bielefeld.de> 2021-10-05 16:33:13 +0200;
a80a340 Re-documented parseMbRecord and parseMassBank Enabled parsing of multiple files in parseMassBank by Paul Stahlhofen <paul.stahlhofen@uni-bielefeld.de> 2021-10-01 13:11:54 +0200;
8e137eb Removed old method 'compileRecord' with all its cross-references from Roxygen-tags by Paul Stahlhofen <paul.stahlhofen@uni-bielefeld.de> 2021-09-29 15:32:40 +0200;
8c7e3ad Started to create note-files for documentation-authors by Paul Stahlhofen <paul.stahlhofen@uni-bielefeld.de> 2021-09-28 19:31:33 +0200;
dfa05c4 Changed Roxygen-tags for the following functions - annotator.default - fillback by Paul Stahlhofen <paul.stahlhofen@uni-bielefeld.de> 2021-09-28 19:28:59 +0200;
42eeb54 Merge pull request <a href="#296">#296</a> from pstahlhofen/dev by pstahlhofen <42074847+pstahlhofen@users.noreply.github.com> 2021-09-21 17:55:28 +0200;
b3c20ef Changed argument order in .propertySet to resolve <a href="#260">#260</a> by Paul Stahlhofen <paul.stahlhofen@uni-bielefeld.de> 2021-09-21 17:43:06 +0200;
f72da37 (Re?)Added RCurl to dependencies (Why is it still there? Aren't we using httr?) by Michele Stravs <stravsm@imsb.biol.ethz.ch> 2021-09-13 13:07:36 +0200;
f1bd05a Merge branch 'master' into nz-enhancements by Michele Stravs <stravsm@imsb.biol.ethz.ch> 2021-09-09 08:44:03 +0200;
734453e Bumped version number by Michele Stravs <stravsm@imsb.biol.ethz.ch> 2021-09-09 08:41:03 +0200;
ab936c6 Merge remote-tracking branch 'origin/dev' by Michele Stravs <stravsm@imsb.biol.ethz.ch> 2021-09-09 08:39:53 +0200;
64596fd Merge pull request <a href="#295">#295</a> from pstahlhofen/dev by pstahlhofen <42074847+pstahlhofen@users.noreply.github.com> 2021-09-08 11:49:57 +0200;
e620b97 Adjusted rounding of mass range by Paul Stahlhofen <paul.stahlhofen@uni-bielefeld.de> 2021-09-08 11:46:19 +0200;
68e56d9 Merge pull request <a href="#292">#292</a> from tsufz/dev by Tobias Schulze <tobias.schulze@ufz.de> 2021-09-08 11:17:51 +0200;
d0fd61a Update Emma's email by Tobias Schulze <tobias.schulze@ufz.de> 2021-09-08 11:15:19 +0200;
2b61340 Merge branch 'dev' of https://github.com/MassBank/RMassBank into dev by Tobias Schulze <tobias.schulze@ufz.de> 2021-09-08 11:13:48 +0200;
56af0d0 Merge pull request <a href="#294">#294</a> from pstahlhofen/dev by pstahlhofen <42074847+pstahlhofen@users.noreply.github.com> 2021-09-07 18:22:18 +0200;
75d4aeb closes <a href="#293">#293</a> by Paul Stahlhofen <paul.stahlhofen@uni-bielefeld.de> 2021-09-07 18:14:53 +0200;
112b6b5 Merge pull request <a href="#291">#291</a> from pstahlhofen/logger by pstahlhofen <42074847+pstahlhofen@users.noreply.github.com> 2021-09-07 18:03:08 +0200;
59d86b5 replaced calls to message also in leMsMs.r (was forgotten earlier) by Paul Stahlhofen <paul.stahlhofen@uni-bielefeld.de> 2021-09-07 17:53:55 +0200;
2ba286b fix typo by Tobias Schulze <tobias.schulze@ufz.de> 2021-09-02 12:06:16 +0200;
9a23f3d Update email of Erik and addition of Paul as an author by Tobias Schulze <tobias.schulze@ufz.de> 2021-09-02 11:50:06 +0200;
6fa7aef re-generated documentation and NAMESPACE with Roxygen by Paul Stahlhofen <paul.stahlhofen@uni-bielefeld.de> 2021-08-17 14:17:37 +0200;
e238c13 Replaced calls to `log_info` by `rmb_log_info` by Paul Stahlhofen <paul.stahlhofen@uni-bielefeld.de> 2021-08-17 14:16:27 +0200;
3cc61f2 Simplified logging behaviour - no internal variable in the RMassBank environment is used anymore - instead, an RMassBank logging namespace is created immediately in `settings_example.R`, if a logging file was given - Removed update_appender method (not necessary anymore) by Paul Stahlhofen <paul.stahlhofen@uni-bielefeld.de> 2021-08-17 14:12:06 +0200;
9ce6c23 fix for empty spectra in list.tsv step by Michele Stravs <stravsm@imsb.biol.ethz.ch> 2021-08-12 17:29:55 +0200;
3f0f954 added mAc, fixed vignettes after mode changes by Michele Stravs <stravsm@imsb.biol.ethz.ch> 2021-08-09 19:15:12 +0200;
e81095f fix for some spectra with zero good peaks in aggregation step by Michele Stravs <stravsm@imsb.biol.ethz.ch> 2021-08-06 18:20:19 +0200;