Name Mode Size
..
FisherExactTest.Rd 100644 3 kb
JSONOutput.Rd 100644 2 kb
LRDataset.Rd 100644 2 kb
LargeDataObject-class.Rd 100644 1 kb
PhenList-class.Rd 100644 6 kb
PhenList.Rd 100644 4 kb
PhenStatReport.Rd 100644 3 kb
PhenTestResult-class.Rd 100644 9 kb
PhenTestResult.Rd 100644 4 kb
RRTest.Rd 100644 2 kb
TFDataset.Rd 100644 2 kb
analysedDataset.Rd 100644 1 kb
analysedDatasetPhenList.Rd 100644 0 kb
analysedSubset.Rd 100644 0 kb
analysisResults.Rd 100644 1 kb
batchIn.Rd 100644 1 kb
boxplotResidualBatch.Rd 100644 1 kb
boxplotSexGenotype.Rd 100644 2 kb
boxplotSexGenotypeBatch.Rd 100644 2 kb
boxplotSexGenotypeBatchAdjusted.Rd 100644 2 kb
boxplotSexGenotypeResult.Rd 100644 2 kb
boxplotSexGenotypeWeightBatchAdjusted.Rd 100644 2 kb
categoricalBarplot.Rd 100644 2 kb
checkDataset.Rd 100644 2 kb
classificationTag.Rd 100644 3 kb
columnChecks.Rd 100644 1 kb
columnLevels.Rd 100644 1 kb
comparison.Rd 100644 0 kb
dataset.Rd 100644 0 kb
determiningLambda.Rd 100644 2 kb
dim.Rd 100644 1 kb
finalLRModel.Rd 100644 2 kb
finalModel.Rd 100644 3 kb
finalTFModel.Rd 100644 3 kb
formulaDeterminingLambda.Rd 100644 1 kb
generateGraphs.Rd 100644 1 kb
getColumn.Rd 100644 0 kb
getColumnBatchAdjusted.Rd 100644 0 kb
getColumnView.Rd 100644 0 kb
getColumnWeightBatchAdjusted.Rd 100644 0 kb
getCountMatrices.Rd 100644 0 kb
getDataset.Rd 100644 0 kb
getGenotypeEffect.Rd 100644 1 kb
getMatrix.Rd 100644 0 kb
getPercentageMatrix.Rd 100644 0 kb
getStat.Rd 100644 0 kb
getVariable.Rd 100644 0 kb
getVariables.Rd 100644 0 kb
hemiGenotype.Rd 100644 0 kb
htest-class.Rd 100644 1 kb
htestPhenStat-class.Rd 100644 3 kb
matrixCount.Rd 100644 0 kb
method.Rd 100644 0 kb
methodText.Rd 100644 0 kb
modelFormula.Rd 100644 1 kb
modelFormulaLR.Rd 100644 1 kb
multipleBatches.Rd 100644 0 kb
noSexes.Rd 100644 1 kb
parameters.Rd 100644 0 kb
parserOutputSummary.Rd 100644 1 kb
parserOutputSummaryLR.Rd 100644 1 kb
parserOutputTFSummary.Rd 100644 1 kb
performReverseTransformation.Rd 100644 1 kb
performTransformation.Rd 100644 1 kb
plot.PhenList.Rd 100644 2 kb
plot.PhenTestResult.Rd 100644 2 kb
plotResidualPredicted.Rd 100644 1 kb
printLROutput.Rd 100644 2 kb
printTabStyle.Rd 100644 1 kb
pvalue.Rd 100644 0 kb
qqplotGenotype.Rd 100644 1 kb
qqplotRandomEffects.Rd 100644 1 kb
qqplotRotatedResiduals.Rd 100644 2 kb
recommendMethod.Rd 100644 2 kb
refGenotype.Rd 100644 0 kb
scatterplotGenotypeWeight.Rd 100644 2 kb
scatterplotGenotypeWeightResult.Rd 100644 2 kb
scatterplotSexGenotypeBatch.Rd 100644 2 kb
scatterplotSexGenotypeBatchResult.Rd 100644 2 kb
setBatch.Rd 100644 0 kb
setGenotype.Rd 100644 0 kb
setMissingValue.Rd 100644 0 kb
setSex.Rd 100644 0 kb
setWeight.Rd 100644 0 kb
startLRModel.Rd 100644 3 kb
startModel.Rd 100644 5 kb
startTFModel.Rd 100644 4 kb
subsetText.Rd 100644 0 kb
summaryOutput.Rd 100644 2 kb
summaryPhenListResult.Rd 100644 2 kb
testDataset.Rd 100644 6 kb
testFinalLRModel.Rd 100644 1 kb
testFinalModel.Rd 100644 1 kb
testGenotype.Rd 100644 0 kb
transformation.Rd 100644 0 kb
transformationJSON.Rd 100644 0 kb
transformationText.Rd 100644 0 kb
vectorOutput.Rd 100644 2 kb
vectorOutputMatrices.Rd 100644 1 kb
weightIn.Rd 100644 1 kb