Bioconductor Code: PharmacoGx

Name	Mode	Size
..
CCLEsmall.Rd	100644	1 kb
CMAPsmall.Rd	100644	1 kb
GDSCsmall.Rd	100644	1 kb
HDAC_genes.Rd	100644	1 kb
PharmacoSet-accessors.Rd	100644	23 kb
PharmacoSet-class.Rd	100644	3 kb
PharmacoSet-utils.Rd	100644	3 kb
PharmacoSet.Rd	100644	3 kb
PharmacoSet2.Rd	100644	2 kb
PharmacoSig.Rd	100644	1 kb
amcc.Rd	100644	2 kb
availablePSets.Rd	100644	1 kb
callingWaterfall.Rd	100644	2 kb
checkPsetStructure.Rd	100644	1 kb
computeABC.Rd	100644	3 kb
computeAUC.Rd	100644	3 kb
computeAmax.Rd	100644	1 kb
computeBliss.Rd	100644	1 kb
computeHSA.Rd	100644	1 kb
computeICn.Rd	100644	3 kb
computeLoewe.Rd	100644	2 kb
computeSlope.Rd	100644	1 kb
computeZIP.Rd	100644	1 kb
computeZIPdelta-TreatmentResponseExperiment-method.Rd	100644	2 kb
computeZIPdelta.Rd	100644	1 kb
connectivityScore.Rd	100644	3 kb
cosinePerm.Rd	100644	2 kb
dim-PharmacoSet-method.Rd	100644	0 kb
dot-computeZIPdelta.Rd	100644	4 kb
dot-summarizeSensProfiles.Rd	100644	1 kb
downloadPSet.Rd	100644	2 kb
downloadPertSig.Rd	100644	2 kb
drugDoseResponseCurve.Rd	100644	5 kb
drugPerturbationSig.Rd	100644	2 kb
drugSensitivitySig-PharmacoSet-method.Rd	100644	5 kb
effectToDose.Rd	100644	2 kb
estimateProjParams.Rd	100644	3 kb
filterNoisyCurves.Rd	100644	2 kb
fitTwowayZIP.Rd	100644	2 kb
geneDrugSensitivity.Rd	100644	1 kb
geneDrugSensitivityPBCorr.Rd	100644	2 kb
geneDrugSensitivityPCorr.Rd	100644	2 kb
gwc.Rd	100644	1 kb
hillCurve.Rd	100644	2 kb
intersectPSet.Rd	100644	2 kb
loeweCI.Rd	100644	2 kb
logLogisticRegression.Rd	100644	5 kb
mcc.Rd	100644	1 kb
partialCorQUICKSTOP.Rd	100644	2 kb
plot.PharmacoSig.Rd	100644	2 kb
show-PharmacoSet-method.Rd	100644	0 kb
show-PharmacoSig-method.Rd	100644	1 kb
showSigAnnot-PharmacoSig-method.Rd	100644	1 kb
sub-PharmacoSet-ANY-ANY-ANY-method.Rd	100644	1 kb
subsetTo-PharmacoSet-method.Rd	100644	2 kb
summarizeMolecularProfiles-PharmacoSet-method.Rd	100644	3 kb
summarizeSensitivityProfiles-PharmacoSet-method.Rd	100644	2 kb
updateObject-PharmacoSet-method.Rd	100644	1 kb

README.md

[![R build status](https://github.com/bhklab/PharmacoGx/workflows/R-CMD-check-bioc-devel/badge.svg)](https://github.com/bhklab/PharmacoGx/actions) **Bioc-Release**: ![Bioconductor RELEASE](http://bioconductor.org/shields/build/release/bioc/PharmacoGx.svg) **Bioc-Devel**: ![Bioconductor DEVEL](http://bioconductor.org/shields/build/devel/bioc/PharmacoGx.svg) PharmacoGx ========== R package to analyze large-scale pharmacogenomic datasets. Dependencies: All dependencies are available from CRAN or Bioconductor.