1. PharmacoGx
  2. R
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Name Mode Size
..
GR.R 100755 0 kb
GWC.R 100755 1 kb
PharmacoSet-accessors.R 100755 17 kb
PharmacoSet-class.R 100755 20 kb
PharmacoSet-utils.R 100755 2 kb
RcppExports.R 100644 3 kb
adaptiveMatthewCor.R 100755 0 kb
callingWaterfall.R 100755 0 kb
class-SignatureClass.R 100755 3 kb
computeABC.R 100755 5 kb
computeAUC.R 100755 5 kb
computeAUC_old.R 100755 2 kb
computeAmax.R 100755 3 kb
computeDSS.R 100755 3 kb
computeDrugSensitivity.R 100755 13 kb
computeGR.R 100755 4 kb
computeIC50.R 100755 1 kb
computeICn.R 100755 4 kb
computeSlope.R 100755 2 kb
computeSynergy.R 100755 56 kb
connectivityScore.R 100755 0 kb
cosinePerm.R 100755 0 kb
datasets.R 100755 3 kb
downloadPSet.R 100755 5 kb
downloadSignatures.R 100755 3 kb
drugDoseResponseCurve.R 100755 15 kb
drugPerturbationSig.R 100755 6 kb
filterNoisyCurves.R 100755 3 kb
geneDrugPerturbation.R 100755 3 kb
geneDrugSensitivity.R 100755 9 kb
geneDrugSensitivityPBCorr.R 100755 14 kb
geneDrugSensitivityPCorr.R 100755 12 kb
getRawSensitivityMatrix.R 100755 2 kb
globals.R 100755 0 kb
intersectPSets.R 100755 9 kb
logLogisticRegression.R 100755 10 kb
matthewCor.R 100755 0 kb
mergePSets.R 100755 4 kb
methods-[.R 100755 1 kb
methods-drugSensitivitySig.R 100755 17 kb
methods-intersect.R 100755 0 kb
methods-subsetTo.R 100755 9 kb
methods-summarizeMolecularProfiles.R 100755 10 kb
methods-summarizeSensitivityProfiles.R 100755 8 kb
plotPSig.R 100755 4 kb
rankGeneDrugPerturbation.R 100755 6 kb
rankGeneDrugSensitivity.R 100755 7 kb
sanityCheck.R 100755 5 kb
updateObject-methods.R 100755 1 kb
zzz.R 100755 2 kb
README.md
[![R build status](https://github.com/bhklab/PharmacoGx/workflows/R-CMD-check-bioc-devel/badge.svg)](https://github.com/bhklab/PharmacoGx/actions) **Bioc-Release**: ![Bioconductor RELEASE](http://bioconductor.org/shields/build/release/bioc/PharmacoGx.svg) **Bioc-Devel**: ![Bioconductor DEVEL](http://bioconductor.org/shields/build/devel/bioc/PharmacoGx.svg) PharmacoGx ========== R package to analyze large-scale pharmacogenomic datasets. Dependencies: All dependencies are available from CRAN or Bioconductor.