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@@ -298,12 +298,11 @@ own customized pathway-gene association table. This customized can then
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replaced `path_gene_table` input in functions described in sections 1,2, and 5
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of this manual.
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-```{r customized_gsc}
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+```{r customized_gsc, eval= FALSE}
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data("gscExample")
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-newPathGeneTable <-tableFromGSC(gscExample)
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+newPathGeneTable <-tableFromGSC(gscExample, fromType = NULL)
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-head(newPathGeneTable)
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```
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The the pathway correlation network in section 3 is build upon an MSigDB V6.2,
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