- OncoSimulR
- Graph
-
70a7038
(HEAD -> devel, origin/master, origin/devel, origin/HEAD)
bump x.y.z version to odd y following creation of RELEASE_3_18 branch by
J Wokaty <jennifer.wokaty@sph.cuny.edu>
2023-10-24 10:00:08 -0400;
-
c736f65
(origin/RELEASE_3_18, RELEASE_3_18)
bump x.y.z version to even y prior to creation of RELEASE_3_18 branch by
J Wokaty <jennifer.wokaty@sph.cuny.edu>
2023-10-24 10:00:08 -0400;
-
e54b258
4.3.3: fix failing Linux aarch64 by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2023-07-17 13:22:04 +0200;
-
bee9979
4.3.2: did not update the date by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2023-06-03 09:46:51 +0200;
-
532b977
4.3.1: rftiness seed to MAGELLAN and bug fix when scaling by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2023-06-03 09:41:28 +0200;
-
a506b5c
bump x.y.z version to odd y following creation of RELEASE_3_17 branch by
J Wokaty <jwokaty@users.noreply.github.com>
2023-04-25 10:33:19 -0400;
-
70d2cd7
(origin/RELEASE_3_17, RELEASE_3_17)
bump x.y.z version to even y prior to creation of RELEASE_3_17 branch by
J Wokaty <jwokaty@users.noreply.github.com>
2023-04-25 10:33:19 -0400;
-
8fddac0
4.1.4 --- updated exprTk and removed CXX_STD by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2023-03-08 20:30:52 +0100;
-
eee6c7e
(origin/RELEASE_3_16, RELEASE_3_16)
version bump in release by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2023-02-20 20:06:33 +0100;
-
6a6e79e
no longer needed to specify CXX_STD = CXX14 by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2023-02-20 20:00:22 +0100;
-
6c42fad
version bump in devel by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2023-02-20 20:04:27 +0100;
-
99789c7
no longer needed to specify CXX_STD = CXX14 by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2023-02-20 20:00:22 +0100;
-
2827481
typo in NEWS by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2023-02-20 19:38:19 +0100;
-
19885ad
v.4.1.1: do not import .rbind.data.table by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2023-02-20 19:01:31 +0100;
-
2665ee8
v.4.0.1: do not import .rbind.data.table by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2023-02-20 18:56:24 +0100;
-
a61b2fd
4.1.1: improved and faster intervention tests by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2022-11-24 14:24:15 +0100;
-
68f0ed7
bump x.y.z version to odd y following creation of RELEASE_3_16 branch by
J Wokaty <jennifer.wokaty@sph.cuny.edu>
2022-11-01 11:10:00 -0400;
-
-
ab214e8
bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by
J Wokaty <jennifer.wokaty@sph.cuny.edu>
2022-11-01 11:10:00 -0400;
-
dd44379
3.99.12 by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2022-10-19 21:10:17 +0200;
-
236c8ee
3.99.11: increase max.wall.time in two tests that can take very long in Windoze by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2022-10-13 23:54:17 +0200;
-
7a661a4
3.99.10; faster vignette, onlyCancer=FALSE, plot fails with sensible error if simulation had exception by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2022-10-13 15:32:19 +0200;
-
b5bcb5a
3.99.9: vignette problem ARM64 Mac build? by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2022-10-01 13:40:27 +0200;
-
96de909
3.99.8: unity build, miscell typo fixes by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2022-09-16 01:29:20 +0200;
-
ea2792e
3.99.8 unity build by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2022-09-15 21:31:14 +0200;
-
9d183dd
3.99.8: unity build by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2022-09-15 21:29:51 +0200;
-
7d0e975
3.99.7: c++14 and no o3 in win to try faster build by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2022-09-13 17:28:36 +0200;
-
3c3d972
ooops, wrong date by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2022-09-12 20:23:45 +0200;
-
9579efe
3.99.6: exprtk updated by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2022-09-12 20:21:57 +0200;
-
a65c8e8
exprtk updated by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2022-09-12 18:47:53 +0200;
-
98e9f87
3.99.5; logo funding by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2022-07-19 16:19:56 +0200;
-
add8cdf
3.99.4: fixing failing test.Z-interventions on Mac by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2022-07-04 23:06:23 +0200;
-
5505160
3.99.3: failing a test in Mac OS by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2022-06-30 14:59:27 +0200;
-
4001b0c
3.99.2 by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2022-06-29 15:37:33 +0200;
-
0dae6b3
3.99.2 by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2022-06-29 14:44:37 +0200;
-
79ffadf
3.99.1: interventions, death with fdf, user variables by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2022-06-25 16:24:13 +0200;
-
7af7ac6
bump x.y.z version to odd y following creation of RELEASE_3_15 branch by
Nitesh Turaga <nitesh.turaga@gmail.com>
2022-04-26 15:20:38 +0000;
-
17fdf39
(origin/RELEASE_3_15, RELEASE_3_15)
bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by
Nitesh Turaga <nitesh.turaga@gmail.com>
2022-04-26 15:20:38 +0000;
-
154875d
bump x.y.z version to odd y following creation of RELEASE_3_14 branch by
Nitesh Turaga <nitesh.turaga@gmail.com>
2021-10-26 16:14:49 +0000;
-
7521636
(origin/RELEASE_3_14, RELEASE_3_14)
bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by
Nitesh Turaga <nitesh.turaga@gmail.com>
2021-10-26 16:14:49 +0000;
-
ad38a80
3.1.2, better test of poset transformation by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2021-10-06 22:18:41 +0200;
-
4127435
3.1.1: XOR, AND, OR: plots of DAGs honor all possible values by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2021-10-06 20:38:06 +0200;
-
d7183c4
bump x.y.z version to odd y following creation of RELEASE_3_13 branch by
Nitesh Turaga <nitesh.turaga@gmail.com>
2021-05-19 16:06:18 +0000;
-
3add541
(origin/RELEASE_3_13, RELEASE_3_13)
bump x.y.z version to even y prior to creation of RELEASE_3_13 branch by
Nitesh Turaga <nitesh.turaga@gmail.com>
2021-05-19 16:06:18 +0000;
-
d0ae1fb
increased version to force rebuild with new NEWS file by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2021-05-04 15:12:02 +0200;
-
e524981
NEWS file updated for BioC release by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2021-05-04 15:11:15 +0200;
-
e5e1295
2.99.93; fixed bugs and test errors for three-element vector by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2021-04-30 01:22:43 +0200;
-
43ee9ba
2.99.92: rfitness with a three-element vector for scale and SSWM examples by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2021-04-27 15:58:19 +0200;
-
b56a9e8
v. 2.99.9: fixed one-gene cases, nem in Readme, typos; removin unused code and v.1 from long tests by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2021-04-22 12:27:49 +0200;
-
6f7ba7f
v.2.99.7 by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2020-12-30 16:01:49 +0100;
-
3c244b0
correct date by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2020-12-30 01:43:01 +0100;
-
007e09e
v.2.99.6: no v.1, slightly faster vignette by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2020-12-30 01:39:06 +0100;
-
f417ffe
v. 2.99.6: no v.1 by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2020-12-30 01:29:19 +0100;
-
04c0640
2.99.5 by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2020-12-18 23:20:58 +0100;
-
a43f498
2.99.4 by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2020-12-17 16:07:07 +0100;
-
8d0896d
v. 2.99.3 by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2020-12-13 15:35:47 +0100;
-
630adf2
2.99.2 by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2020-12-11 21:53:48 +0100;
-
4068375
version 2.99.1: frequency-dependent fitness functionality by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2020-12-10 12:41:53 +0100;
-
ddca1e2
bump x.y.z version to odd y following creation of RELEASE_3_12 branch by
Nitesh Turaga <nitesh.turaga@gmail.com>
2020-10-27 10:57:45 -0400;
-
1990185
(origin/RELEASE_3_12, RELEASE_3_12)
bump x.y.z version to even y prior to creation of RELEASE_3_12 branch by
Nitesh Turaga <nitesh.turaga@gmail.com>
2020-10-27 10:57:45 -0400;
-
f4821fe
2.19.2: Updated ctb: added Magellan and exprTk and clarified contributions by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2020-06-03 15:57:39 +0200;
-
0a9f141
2.19.1 by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2020-05-06 12:10:54 +0200;
-
5d22ac2
bump x.y.z version to odd y following creation of RELEASE_3_11 branch by
Nitesh Turaga <nitesh.turaga@gmail.com>
2020-04-27 18:41:48 +0000;
-
f3a1274
(origin/RELEASE_3_11, RELEASE_3_11)
bump x.y.z version to even y prior to creation of RELEASE_3_11 branch by
Nitesh Turaga <nitesh.turaga@gmail.com>
2020-04-27 18:41:48 +0000;
-
a947da6
2.17.92 by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2020-04-27 01:20:51 +0200;
-
4df5e78
oooops, was failing tests in windows by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2020-04-24 04:20:12 +0200;
-
ae7dfb0
2.17.91: fixed warning with Wrestrict from Magellan sources by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2020-04-24 03:29:59 +0200;
-
2d6b985
(origin/RELEASE_3_10, RELEASE_3_10)
2.16.1; fixed warnings and "the condition has length > 1" by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2020-04-10 14:23:01 +0200;
-
36283a6
2.17.9: POM doc and adapt to stringsAsFactors = FALSE by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2020-03-17 13:31:37 +0100;
-
087f64d
2.17.8 by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2020-02-02 00:58:49 +0100;
-
eb53711
2.17.7: no longer depends on nem; more models from MAGELLAN by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2020-01-30 14:39:14 +0100;
-
71e4aac
2.17.5 by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2019-12-19 21:22:38 +0100;
-
0796b29
2.17.4 by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2019-12-19 09:27:20 +0100;
-
00d80a9
2.17.3: here is where fno-common should be by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2019-12-17 16:17:37 +0100;
-
f63ae90
2.17.2: fno-common by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2019-12-17 16:14:43 +0100;
-
4912fe1
2.17.2: if with logical length > 1 fixed by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2019-12-17 12:25:52 +0100;
-
edc593d
2.17.1: rfitness, clarified log and truncate, and Magellan_stats, return vector and do not use log by default by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2019-11-28 20:58:05 +0100;
-
f973f21
bump x.y.z version to odd y after creation of RELEASE_3_10 branch by
Nitesh Turaga <nitesh.turaga@gmail.com>
2019-10-29 13:37:44 -0400;
-
-
753d7de
bump x.y.z version to even y prior to creation of RELEASE_3_10 branch by
Nitesh Turaga <nitesh.turaga@gmail.com>
2019-10-29 13:09:01 -0400;
-
fefc3cf
fscanf warning under Linux with BioC by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2019-08-14 12:38:39 +0200;
-
fd073de
2.15.1: Added MAGELLANs sources and functionality from MAGELLAN by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2019-07-02 16:55:40 +0200;
-
cba8a2f
bump x.y.z versions to odd y after creation of RELEASE_3_9 branch by
Nitesh Turaga <nitesh.turaga@gmail.com>
2019-05-02 12:11:39 -0400;
-
2a871d8
(origin/RELEASE_3_9, RELEASE_3_9)
bump x.y.z versions to even y prior to creation of RELEASE_3_9 branch by
Nitesh Turaga <nitesh.turaga@gmail.com>
2019-05-02 11:53:48 -0400;
-
4ac900b
2.13.2 by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2019-03-18 12:11:47 +0100;
-
edc25f8
v 2.13.1: works with STRICT_R_HEADERS by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2019-02-07 19:45:19 +0100;
-
4116089
bump x.y.z versions to odd y after creation of RELEASE_3_8 branch by
vobencha <vobencha@gmail.com>
2018-10-30 11:54:33 -0400;
-
10d3d45
(origin/RELEASE_3_8, RELEASE_3_8)
bump x.y.z versions to even y prior to creation of RELEASE_3_8 branch by
vobencha <vobencha@gmail.com>
2018-10-30 11:41:54 -0400;
-
1e56118
ooops, did not bump version by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2018-07-20 21:11:42 +0200;
-
65fa139
no longer refs to older installer and robustify one test by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2018-07-16 22:27:32 +0200;
-
546b7e7
bump x.y.z versions to odd y after creation of RELEASE_3_7 branch by
vobencha <valerie.obenchain@roswellpark.org>
2018-04-30 10:41:40 -0400;
-
ed30da1
(origin/RELEASE_3_7, RELEASE_3_7)
bump x.y.z versions to even y prior to creation of RELEASE_3_7 branch by
vobencha <valerie.obenchain@roswellpark.org>
2018-04-30 10:35:33 -0400;
-
302b161
2.9.10: test.Z-fixation: some tests only on Linux because rng is done in C++. by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2018-04-19 21:17:38 +0200;
-
e719a81
2.9.9 by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2018-04-18 01:58:39 +0200;
-
885ead9
v. 2.9.6 by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2017-12-27 14:28:03 +0100;
-
23b7c97
clang was failing in mac by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2017-11-27 11:04:35 +0100;
-
ab43994
v. 2.9.2 - LOD: using only the strict Szendro et al. meaning. - POM: computed in C++. - Using fitness landscape directly when given as input (no conversion to epistasis) by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2017-11-24 13:41:48 +0100;
-
701c5ac
bump x.y.z versions to odd y after creation of RELEASE_3_6 branch by
Hervé Pagès <hpages@fredhutch.org>
2017-10-30 12:53:30 -0400;
-
4e3de2b
(origin/RELEASE_3_6, RELEASE_3_6)
bump x.y.z versions to even y prior to creation of RELEASE_3_6 branch by
Hervé Pagès <hpages@fredhutch.org>
2017-10-30 12:40:20 -0400;
-
f9a38e2
version 2.7.2 Changes in version 2.7.2 (2017-09-27): - genot_to_adj_mat in C++. - fast_peaks (for no backmutation cases). - Better explanation and testing of peaks and valleys. - Clarified simOGraph transitive reduction. - Better handling of ti corner cases. - Magellan reading fuctions adapted to output of newer (as of 2017-07) version of Magellan. - sorting gene names in allGenotypes_to_matrix. - sampledGenotypes: genotype names with sorted gene names. by
ramon diaz-uriarte (at Phelsuma) <rdiaz02@gmail.com>
2017-09-27 12:23:50 +0200;
-
6e0554b
bump x.y.z versions to odd y after creation of 3_5 branch by
Herve Pages <hpages@fhcrc.org>
2017-04-24 19:50:57 +0000;
-
05e566c
(origin/RELEASE_3_5, RELEASE_3_5)
Creating branch for BioC 3.5 release by
Herve Pages <hpages@fhcrc.org>
2017-04-24 19:45:44 +0000;
-