November 28, 2019
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2.17.1: rfitness, clarified log and truncate, and Magellan_stats, return vector and do not use log by default

ramon diaz-uriarte (at Phelsuma) authored on 28/11/2019 19:58:05
July 2, 2019
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2.15.1: Added MAGELLANs sources and functionality from MAGELLAN

ramon diaz-uriarte (at Phelsuma) authored on 02/07/2019 14:55:40
March 18, 2019
View4ac900b

2.13.2

ramon diaz-uriarte (at Phelsuma) authored on 18/03/2019 11:11:47
February 7, 2019
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v 2.13.1: works with STRICT_R_HEADERS

ramon diaz-uriarte (at Phelsuma) authored on 07/02/2019 18:45:19
April 19, 2018
View302b161

2.9.10: test.Z-fixation: some tests only on Linux because rng is done in C++.

ramon diaz-uriarte (at Phelsuma) authored on 19/04/2018 19:17:38
April 17, 2018
Viewe719a81

2.9.9

ramon diaz-uriarte (at Phelsuma) authored on 17/04/2018 23:58:39
December 27, 2017
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v. 2.9.6

ramon diaz-uriarte (at Phelsuma) authored on 27/12/2017 13:28:03
November 24, 2017
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v. 2.9.2 - LOD: using only the strict Szendro et al. meaning. - POM: computed in C++. - Using fitness landscape directly when given as input (no conversion to epistasis)

ramon diaz-uriarte (at Phelsuma) authored on 24/11/2017 12:41:48
September 27, 2017
Viewf9a38e2

version 2.7.2 Changes in version 2.7.2 (2017-09-27): - genot_to_adj_mat in C++. - fast_peaks (for no backmutation cases). - Better explanation and testing of peaks and valleys. - Clarified simOGraph transitive reduction. - Better handling of ti corner cases. - Magellan reading fuctions adapted to output of newer (as of 2017-07) version of Magellan. - sorting gene names in allGenotypes_to_matrix. - sampledGenotypes: genotype names with sorted gene names.

ramon diaz-uriarte (at Phelsuma) authored on 27/09/2017 10:23:50
April 7, 2017
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2.5.13: updated NEWS for BioC 3.5 release

Ramon Diaz-Uriarte authored on 07/04/2017 08:19:25
February 18, 2017
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v.2.5.12

Ramon Diaz-Uriarte authored on 18/02/2017 20:20:42
January 8, 2017
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2.5.9; code coverage comments in vignette

Ramon Diaz-Uriarte authored on 08/01/2017 23:16:08
December 15, 2016
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2.5.7; vignette work

Ramon Diaz-Uriarte authored on 15/12/2016 18:43:47
December 14, 2016
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2.5.5; vignette fixes

Ramon Diaz-Uriarte authored on 14/12/2016 12:53:22
December 10, 2016
Viewfc38a87

v.2.5.2 - Lots and lots of addition to vignette including benchmarks. - Diversity of sampled genotypes. - Genotyping error can be added in samplePop. - LOD and POM (lines of descent, path of maximum, sensu Szendro et al.). - simOGraph can also out rT data frames. - Better (and better explained) estimates of simulation error for McFL.

Ramon Diaz-Uriarte authored on 10/12/2016 16:05:05