April 17, 2018
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2.9.9

ramon diaz-uriarte (at Phelsuma) authored on 17/04/2018 23:58:39
December 27, 2017
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v. 2.9.6

ramon diaz-uriarte (at Phelsuma) authored on 27/12/2017 13:28:03
November 24, 2017
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v. 2.9.2 - LOD: using only the strict Szendro et al. meaning. - POM: computed in C++. - Using fitness landscape directly when given as input (no conversion to epistasis)

ramon diaz-uriarte (at Phelsuma) authored on 24/11/2017 12:41:48
September 27, 2017
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version 2.7.2 Changes in version 2.7.2 (2017-09-27): - genot_to_adj_mat in C++. - fast_peaks (for no backmutation cases). - Better explanation and testing of peaks and valleys. - Clarified simOGraph transitive reduction. - Better handling of ti corner cases. - Magellan reading fuctions adapted to output of newer (as of 2017-07) version of Magellan. - sorting gene names in allGenotypes_to_matrix. - sampledGenotypes: genotype names with sorted gene names.

ramon diaz-uriarte (at Phelsuma) authored on 27/09/2017 10:23:50
February 18, 2017
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v.2.5.12

Ramon Diaz-Uriarte authored on 18/02/2017 20:20:42
January 8, 2017
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2.5.9; code coverage comments in vignette

Ramon Diaz-Uriarte authored on 08/01/2017 23:16:08
December 17, 2016
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2.5.8; handle trivial cases in genotFitness

Ramon Diaz-Uriarte authored on 17/12/2016 12:59:03
December 10, 2016
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v.2.5.2 - Lots and lots of addition to vignette including benchmarks. - Diversity of sampled genotypes. - Genotyping error can be added in samplePop. - LOD and POM (lines of descent, path of maximum, sensu Szendro et al.). - simOGraph can also out rT data frames. - Better (and better explained) estimates of simulation error for McFL.

Ramon Diaz-Uriarte authored on 10/12/2016 16:05:05
November 13, 2016
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v.2.5.1. \n - much faster accessible genots \n - AND of drivers and size \n - fixation \n - doc. improvements

Ramon Diaz-Uriarte authored on 13/11/2016 09:46:27
September 22, 2016
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2.3.17; vignette: typos, decreased size and time

Ramon Diaz-Uriarte authored on 22/09/2016 16:47:10
August 10, 2016
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2.3.11;\n - evalAllGenotypes: order = FALSE by default; \n - Clarified difference plotFitnessEffects and plotFitnessLandscape.

Ramon Diaz-Uriarte authored on 10/08/2016 15:47:33
July 9, 2016
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v.2.3.9. accessible genotypes

Ramon Diaz-Uriarte authored on 09/07/2016 13:43:10
July 8, 2016
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v.2.3.8

Ramon Diaz-Uriarte authored on 08/07/2016 11:17:18
July 5, 2016
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v.2.3.7; detectionProb mechanism;\n documentation enhancements;\n more tests

Ramon Diaz-Uriarte authored on 05/07/2016 15:59:56
June 25, 2016
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v.2.3.6;\n improved test coverage

Ramon Diaz-Uriarte authored on 25/06/2016 16:08:52