@@ -1,8 +1,8 @@

 Package: OncoSimulR

 Type: Package

 Title: Forward Genetic Simulation of Cancer Progression with Epistasis 

-Version: 2.3.15

-Date: 2016-09-14

+Version: 2.3.16

+Date: 2016-09-19

 Authors@R: c(person("Ramon", "Diaz-Uriarte", role = c("aut", "cre"),

 		     email = "rdiaz02@gmail.com"),

 	      person("Mark", "Taylor", role = "ctb", email = "ningkiling@gmail.com"))

@@ -1,3 +1,6 @@

+Changes in version 2.3.16 (2017-09-19):

+	- Help was not accurate for some probSize args

+	

 Changes in version 2.3.15 (2017-09-14):

 	- Typo in name (progresion)

@@ -222,23 +222,23 @@ simulations.

   named elements (see \sQuote{Details}):

   \itemize{

-    \item{PDBaseline}{Baseline size subtracted to total population size

+    \item{PDBaseline:}{ Baseline size subtracted to total population size

     to compute the probability of detection. If not given explicitly,

     the default is \code{1.2 * initSize}.

     }

-    \item{p2}{The probability of detection at population size

+    \item{p2:}{ The probability of detection at population size

     \code{n2}. If you specificy \code{p2} you must also specify

     \code{n2} and you must not specify \code{cPDetect}. The fault is 0.1.}

-    \item{n2}{The population size at which probability of detection is

-      \code{p2}. The default is \code{1.1*initSize}.}

+    \item{n2:}{ The population size at which probability of detection is

+      \code{p2}. The default is \code{2 * initSize}.}

-    \item{cPDetect}{The change in probability of detection with size. If

+    \item{cPDetect:}{ The change in probability of detection with size. If

       you specify it, you should not specify either of \code{p2} or

       \code{n2}. See \sQuote{Details}.  }

-    \item{checkSizePEvery}{Time between successive checks for the

+    \item{checkSizePEvery:}{ Time between successive checks for the

     probability of exiting as a function of population size. If not

     given explicitly, the default is 20. See \sQuote{Details}.}

@@ -93,6 +93,7 @@ bool detectedSizeP(const double n, const double cPDetect,

   } else {

     std::uniform_real_distribution<double> runif(0.0, 1.0);

     double prob = probDetectSize(n, cPDetect, PDBaseline);

+    if(prob <= 0.0) return false;

     if(runif(ran_gen) <= prob) {

       return true;

     } else {