@article{Turei2016,
doi = {10.1038/nmeth.4077},
url = {https://doi.org/10.1038/nmeth.4077},
year = {2016},
month = nov,
publisher = {Springer Science and Business Media {LLC}},
volume = {13},
number = {12},
pages = {966--967},
author = {D{\'{e}}nes T\"{u}rei and Tam{\'{a}}s Korcsm{\'{a}}ros and Julio Saez-Rodriguez},
title = {{OmniPath}: guidelines and gateway for literature-curated signaling pathway resources},
journal = {Nature Methods}
}
@article{GarciaAlonso2019,
doi = {10.1101/gr.240663.118},
url = {https://doi.org/10.1101/gr.240663.118},
year = {2019},
month = jul,
publisher = {Cold Spring Harbor Laboratory},
volume = {29},
number = {8},
pages = {1363--1375},
author = {Luz Garcia-Alonso and Christian H. Holland and Mahmoud M. Ibrahim and Denes Turei and Julio Saez-Rodriguez},
title = {Benchmark and integration of resources for the estimation of human transcription factor activities},
journal = {Genome Research}
}
@article{Dinkel2010,
doi = {10.1093/nar/gkq1104},
url = {https://doi.org/10.1093/nar/gkq1104},
year = {2010},
month = nov,
publisher = {Oxford University Press ({OUP})},
volume = {39},
number = {Database},
pages = {D261--D267},
author = {H. Dinkel and C. Chica and A. Via and C. M. Gould and L. J. Jensen and T. J. Gibson and F. Diella},
title = {Phospho.{ELM}: a database of phosphorylation sites--update 2011},
journal = {Nucleic Acids Research}
}
@article{Hornbeck2014,
doi = {10.1093/nar/gku1267},
url = {https://doi.org/10.1093/nar/gku1267},
year = {2014},
month = dec,
publisher = {Oxford University Press ({OUP})},
volume = {43},
number = {D1},
pages = {D512--D520},
author = {Peter V. Hornbeck and Bin Zhang and Beth Murray and Jon M. Kornhauser and Vaughan Latham and Elzbieta Skrzypek},
title = {{PhosphoSitePlus}, 2014: mutations, {PTMs} and recalibrations},
journal = {Nucleic Acids Research}
}
@article{Giurgiu2018,
doi = {10.1093/nar/gky973},
url = {https://doi.org/10.1093/nar/gky973},
year = {2018},
month = oct,
publisher = {Oxford University Press ({OUP})},
volume = {47},
number = {D1},
pages = {D559--D563},
author = {Madalina Giurgiu and Julian Reinhard and Barbara Brauner and Irmtraud Dunger-Kaltenbach and Gisela Fobo and Goar Frishman and Corinna Montrone and Andreas Ruepp},
title = {{CORUM}: the comprehensive resource of mammalian protein complexes{\textemdash}2019},
journal = {Nucleic Acids Research}
}
@article{Drew2017,
doi = {10.15252/msb.20167490},
url = {https://doi.org/10.15252/msb.20167490},
year = {2017},
month = jun,
publisher = {{EMBO}},
volume = {13},
number = {6},
pages = {932},
author = {Kevin Drew and Chanjae Lee and Ryan L Huizar and Fan Tu and Blake Borgeson and Claire D McWhite and Yun Ma and John B Wallingford and Edward M Marcotte},
title = {Integration of over 9, 000 mass spectrometry experiments builds a global map of human protein~complexes},
journal = {Molecular Systems Biology}
}
@article{Dobson2014,
doi = {10.1093/nar/gku1119},
url = {https://doi.org/10.1093/nar/gku1119},
year = {2014},
month = nov,
publisher = {Oxford University Press ({OUP})},
volume = {43},
number = {D1},
pages = {D283--D289},
author = {L{\'{a}}szl{\'{o}} Dobson and Tam{\'{a}}s Lang{\'{o}} and Istv{\'{a}}n Rem{\'{e}}nyi and G{\'{a}}bor E. Tusn{\'{a}}dy},
title = {Expediting topology data gathering for the {TOPDB} database},
journal = {Nucleic Acids Research}
}
@article{Keerthikumar2016,
doi = {10.1016/j.jmb.2015.09.019},
url = {https://doi.org/10.1016/j.jmb.2015.09.019},
year = {2016},
month = feb,
publisher = {Elsevier {BV}},
volume = {428},
number = {4},
pages = {688--692},
author = {Shivakumar Keerthikumar and David Chisanga and Dinuka Ariyaratne and Haidar Al Saffar and Sushma Anand and Kening Zhao and Monisha Samuel and Mohashin Pathan and Markandeya Jois and Naveen Chilamkurti and Lahiru Gangoda and Suresh Mathivanan},
title = {{ExoCarta}: A Web-Based Compendium of Exosomal Cargo},
journal = {Journal of Molecular Biology}
}
@article{VentoTormo2018,
doi = {10.1038/s41586-018-0698-6},
url = {https://doi.org/10.1038/s41586-018-0698-6},
year = {2018},
month = nov,
publisher = {Springer Nature},
volume = {563},
number = {7731},
pages = {347--353},
author = {Roser Vento-Tormo and Mirjana Efremova and Rachel A. Botting and Margherita Y. Turco and Miquel Vento-Tormo and Kerstin B. Meyer and Jong-Eun Park and Emily Stephenson and Krzysztof Pola{\'{n}}ski and Angela Goncalves and Lucy Gardner and Staffan Holmqvist and Johan Henriksson and Angela Zou and Andrew M. Sharkey and Ben Millar and Barbara Innes and Laura Wood and Anna Wilbrey-Clark and Rebecca P. Payne and Martin A. Ivarsson and Steve Lisgo and Andrew Filby and David H. Rowitch and Judith N. Bulmer and Gavin J. Wright and Michael J. T. Stubbington and Muzlifah Haniffa and Ashley Moffett and Sarah A. Teichmann},
title = {Single-cell reconstruction of the early maternal{\textendash}fetal interface in humans},
journal = {Nature}
}
@article{BenShlomo2003,
doi = {10.1126/stke.2003.187.re9},
url = {https://doi.org/10.1126/stke.2003.187.re9},
year = {2003},
month = jun,
publisher = {American Association for the Advancement of Science ({AAAS})},
volume = {2003},
number = {187},
pages = {re9--re9},
author = {I. Ben-Shlomo and S. Yu Hsu and R. Rauch and H. W. Kowalski and A. J. W. Hsueh},
title = {Signaling Receptome: A Genomic and Evolutionary Perspective of Plasma Membrane Receptors Involved in Signal Transduction},
journal = {Science Signaling}
}
@article{Berggrd2007,
doi = {10.1002/pmic.200700131},
url = {https://doi.org/10.1002/pmic.200700131},
year = {2007},
month = aug,
publisher = {Wiley},
volume = {7},
number = {16},
pages = {2833--2842},
author = {Tord Bergg{\aa}rd and Sara Linse and Peter James},
title = {Methods for the detection and analysis of protein{\textendash}protein interactions},
journal = {{PROTEOMICS}}
}
