^.*\.Rproj$ ^\.Rproj\.user$ ^LICENSE\.md$ ^_pkgdown\.yml$ ^doc.*$ ^pkgdown$ ^OmnipathR.Rcheck.*$ ^OmnipathR-manual.*$ ^openout.+$ .+\.Rdata ^[^/]+\.png$ ^[^/]+\.pdf$ ^[^/]+\.r$ ^[^/]+\.R$ ^[^/]+\.Rmd$ ^[^/]+\.html$ ^[^/]+\.svg$ .+\.tar\.gz$ ^bioctest.*$ ^Renviron\.bioc$ ^nichenet_original_data.*$ ^.Rd2pdf.*$ ^vignettes/figure/.*$ vignettes/figure ^vignettes/Rplots.pdf$ ^vignettes/.*pdf$ ^vignettes/.*html$ ^vignettes/omnipathr-log.*$ ^[^/]\.pdf$ ^nichenet_results ^bioc-2021-spring.*$ ^tmp_cache.*$ ^archives.*$ ^.*\.log$ .*/testdir.*$ ^tests/testthat/_snaps .*kate-swp$ ^omnipathr-log.*$ ^man/figures.*$ ^\.git_fetch_output\.txt$ ^\.git_merge_output\.txt$ ^docs ^attic ^tmppkg OmnipathR\.BiocCheck ^\.bumpversion\.cfg$ ^tmp.*$ r-devel-ubuntu.sh ssl-issues ^playground.*$ ^build.*$