Name Mode Size
annotate.R 100644 2 kb
biotypeOperations.R 100644 3 kb
enrichment.R 100644 8 kb
expData.R 100644 2 kb
expressionBased.R 100644 7 kb
geneEnrichment.R 100644 32 kb
getNearest.R 100644 23 kb
mirnaEnrichment.R 100644 42 kb
pathway.R 100644 28 kb
plot.R 100644 17 kb
reverse.R 100644 1 kb
zzz.R 100644 0 kb
# NoRCE: Non-coding RNA Sets Cis Enrichment Tool Non-coding RNA Sets Cis Enrichment Tool (NoRCE) performs cis enrichment analysis for a given set of ncRNAs. Enrichment is carried out by using the functional annotations of the coding genes located proximally to the input ncRNAs. NoRCE allows incorporating other biological information such as the topologically associating domain (TAD) regions, co-expression patterns, and miRNA target information. NoRCE repository includes several data files, such as cell line specific TAD regions, functional gene sets, and cancer expression data. Additionally, users can input custom data files. Results can be retrieved in a tabular format or viewed as graphs. NoRCE is currently available for the following species: human, mouse, rat, zebrafish, fruit fly, worm and yeast.