# Generated by roxygen2: do not edit by hand

 export(KGML2igraph)
 export(NPMdefaults)
 export(SBML2igraph)
 export(assignEdgeWeights)
 export(biopax2igraph)
 export(colorVertexByAttr)
 export(expandComplexes)
 export(extractPathNetwork)
 export(fetchAttribute)
 export(getAttrNames)
 export(getAttrStatus)
 export(getAttribute)
 export(getGeneSetNetworks)
 export(getGeneSets)
 export(getPathsAsEIDs)
 export(layoutVertexByAttr)
 export(makeGeneNetwork)

 export(makeMetaboliteNetwork)

 export(makeReactionNetwork)
 export(pathClassifier)
 export(pathCluster)
 export(pathRanker)
 export(pathsToBinary)
 export(plotAllNetworks)
 export(plotClassifierROC)
 export(plotClusterMatrix)
 export(plotClusterProbs)
 export(plotClusters)

 export(plotCytoscapeGML)

 export(plotNetwork)
 export(plotPathClassifier)
 export(plotPathCluster)
 export(plotPaths)
 export(predictPathClassifier)
 export(predictPathCluster)
 export(registerMemoryErr)

 export(reindexNetwork)

 export(rmAttribute)
 export(rmSmallCompounds)
 export(samplePaths)
 export(setAttribute)
 export(simplifyReactionNetwork)
 export(stdAttrNames)
 export(toGraphNEL)
 export(vertexDeleteReconnect)
 import(igraph)
 useDynLib(NetPathMiner)