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README.md
# Mass Spectrometry Data Backend for Mascot Generic Format (mgf) Files [![Project Status: Active – The project has reached a stable, usable state and is being actively developed.](https://www.repostatus.org/badges/latest/active.svg)](https://www.repostatus.org/#active) [![R-CMD-check-bioc](https://github.com/RforMassSpectrometry/MsBackendMgf/workflows/R-CMD-check-bioc/badge.svg)](https://github.com/RforMassSpectrometry/MsBackendMgf/actions?query=workflow%3AR-CMD-check-bioc) [![codecov](https://codecov.io/gh/rformassspectrometry/MsBackendMgf/branch/main/graph/badge.svg?token=R1VB6BmWAK)](https://codecov.io/gh/rformassspectrometry/MsBackendMgf) [![license](https://img.shields.io/badge/license-Artistic--2.0-brightgreen.svg)](https://opensource.org/licenses/Artistic-2.0) [![years in bioc](http://bioconductor.org/shields/years-in-bioc/MsBackendMgf.svg)](https://bioconductor.org/packages/release/bioc/html/MsBackendMgf.html) [![Ranking by downloads](http://bioconductor.org/shields/downloads/release/MsBackendMgf.svg)](https://bioconductor.org/packages/stats/bioc/MsBackendMgf/) [![build release](http://bioconductor.org/shields/build/release/bioc/MsBackendMgf.svg)](https://bioconductor.org/checkResults/release/bioc-LATEST/MsBackendMgf/) [![build devel](http://bioconductor.org/shields/build/devel/bioc/MsBackendMgf.svg)](https://bioconductor.org/checkResults/devel/bioc-LATEST/MsBackendMgf/) The `MsBackendMgf` package provides functionality to import and handle MS/MS spectrum data from Mascot Generic Format ([mgf](http://www.matrixscience.com/help/data_file_help.html)) files. The package defines the `MsBackendMgf` backend which can be used to import and use MS2 spectrum data from mgf files with the [Spectra](https://github.com/rformassspectrometry/Spectra) R package. For more information see the package [homepage](https://rformassspectrometry.github.io/MsBackendMgf). # Installation The package can be installed with ```r install.packages("BiocManager") BiocManager::install("MsBackendMgf") ``` # Contributions Contributions are highly welcome and should follow the [contribution guidelines](https://rformassspectrometry.github.io/RforMassSpectrometry/articles/RforMassSpectrometry.html#contributions). Also, please check the coding style guidelines in the [RforMassSpectrometry vignette](https://rformassspectrometry.github.io/RforMassSpectrometry/articles/RforMassSpectrometry.html).