1. MotifDb
  2. build.makefile
Browse code

updated show method, renamed to makefile

paul-shannon authored on 04/03/2022 21:16:37
Showing 1 changed files
build.makefile
History View file @ 5b92878
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deleted file mode 100644
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@@ -1,26 +0,0 @@
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-quick: install
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-
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-all:  install vig build check
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-
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-vig:
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-	R -e "devtools::build_vignettes()"
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-
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-build:
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-	(cd ..; R CMD build --no-build-vignettes MotifDb)
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-
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-install:
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-	(cd ..; R CMD INSTALL MotifDb)
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-
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-check: build
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-	(cd ..; R CMD check --no-manual --no-build-vignettes --ignore-vignettes `ls -t MotifDb_* | head -1`)
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-
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-biocCheck:
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-	(cd ..; R CMD BiocCheck `ls -t MotifDb_* | head -1`)
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-
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-unitTests: test
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-
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-test:
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-	 for x in inst/unitTests/test_*.R; do echo ============== $$x; R -f $$x; done
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-
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-site:
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-	R -e "devtools::build_site()"
Browse code

full version restored

paul-shannon authored on 03/10/2021 15:49:33
Showing 1 changed files
build.makefile
History View file @ 67a8189
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@@ -1,4 +1,15 @@
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-oMotifDb)
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+quick: install
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+
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+all:  install vig build check
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+
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+vig:
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+	R -e "devtools::build_vignettes()"
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+
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+build:
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+	(cd ..; R CMD build --no-build-vignettes MotifDb)
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+
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+install:
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+	(cd ..; R CMD INSTALL MotifDb)
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 check: build
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 	(cd ..; R CMD check --no-manual --no-build-vignettes --ignore-vignettes `ls -t MotifDb_* | head -1`)
Browse code

fixed onload error, moved tfs RData file to tfs directory

paul-shannon authored on 03/10/2021 15:37:53
Showing 1 changed files
build.makefile
History View file @ 8feeb4a
... ... 
@@ -1,15 +1,4 @@
1 
-quick: install
2 
-
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-all:  install vig build check
4 
-
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-vig:
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-	R -e "devtools::build_vignettes()"
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-
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-build:
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-	(cd ..; R CMD build --no-build-vignettes MotifDb)
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-
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-install:
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-	(cd ..; R CMD INSTALL --no-test-load MotifDb)
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+oMotifDb)
13 2
14 3 
 check: build
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 	(cd ..; R CMD check --no-manual --no-build-vignettes --ignore-vignettes `ls -t MotifDb_* | head -1`)
Browse code

removed motifmatchr and its dependencies

paul-shannon authored on 02/04/2020 20:20:03
Showing 1 changed files
build.makefile
History View file @ a3aca6d
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@@ -1,6 +1,6 @@
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 quick: install
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-all:  vig build check
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+all:  install vig build check
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5 5 
 vig:
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 	R -e "devtools::build_vignettes()"
Browse code

provisional addition of hocomoco v1, with reliability scores, A-D

paul-shannon authored on 10/03/2020 00:06:57
Showing 1 changed files
build.makefile
History View file @ 5b88116
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new file mode 100644
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+quick: install
2 
+
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+all:  vig build check
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+
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+vig:
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+	R -e "devtools::build_vignettes()"
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+
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+build:
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+	(cd ..; R CMD build --no-build-vignettes MotifDb)
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+
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+install:
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+	(cd ..; R CMD INSTALL --no-test-load MotifDb)
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+
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+check: build
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+	(cd ..; R CMD check --no-manual --no-build-vignettes --ignore-vignettes `ls -t MotifDb_* | head -1`)
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+
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+biocCheck:
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+	(cd ..; R CMD BiocCheck `ls -t MotifDb_* | head -1`)
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+
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+unitTests: test
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+
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+test:
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+	 for x in inst/unitTests/test_*.R; do echo ============== $$x; R -f $$x; done
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+
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+site:
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+	R -e "devtools::build_site()"