October 24, 2018
View5da060a

improved docs for query method

paul-shannon authored on 24/10/2018 19:02:56
October 18, 2018
View4b66948

big speedup of associateTranscriptionFactors method, exploiting duplicate motifs

paul-shannon authored on 18/10/2018 14:18:37
August 17, 2018
View42f0181

added explicit return from plotMotifs

paul-shannon authored on 17/08/2018 16:54:08
June 3, 2018
View48c3af4

motif/tf mapping now includes the 'both' option, tfclass and motifdb. motifStack plotting added

paul-shannon authored on 03/06/2018 18:31:01
May 23, 2018
View9535d30

motifToGene fix: now combined empty source table with populated table

paul-shannon authored on 23/05/2018 18:32:17
May 18, 2018
Viewfda2dea

associateTranscriptionFactors greatly simplified, builds upon motifToGene

paul-shannon authored on 18/05/2018 23:22:10
Viewaaf4e1a

motifToGene refactored, now suuports c('motifDb', tfClass') sources

paul-shannon authored on 18/05/2018 22:05:19
May 10, 2018
View3cb31fd

added query2(mdb, andTerms, orTerms=c(), notTerms=c())

paul-shannon authored on 10/05/2018 23:52:12
April 9, 2018
View388ccbc

added cisbp 2014 reference

paul-shannon authored on 09/04/2018 05:47:55
February 2, 2018
View68ba7eb

motifToGene and geneToMotif now guard against emtpy tables, ignore.cae option added

paul-shannon authored on 02/02/2018 00:04:51
January 23, 2018
Viewe2f7996

removed test_Imports.R, pkg passes CHECK

paul-shannon authored on 23/01/2018 18:14:17
View5f111ac

added unit test to clarify geneToMotif results

paul-shannon authored on 23/01/2018 16:54:36
December 8, 2017
Viewb7a40ef

Added jaspar 2018

Matthew Richards authored on 08/12/2017 02:17:22
October 20, 2017
Viewb6c129a

Fixed labeling of cisbp motifs

Matthew Richards authored on 20/10/2017 20:45:38
October 4, 2017
View8c4dd89

Removed large text files

Matthew Richards authored on 04/10/2017 22:42:47