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View 1ae931f
tracking down motif name equality bugpaul-shannon authored on 04/10/2017 22:07:08 |
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getlocale in failing testpaul-shannon authored on 04/10/2017 21:10:45 |
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documentation for geneToMotif, motifToGene, associateT...paul-shannon authored on 04/10/2017 19:49:25 |
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lexical only: renamed 2 variablespaul-shannon authored on 04/10/2017 17:49:04 |
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motifToGene sidesteps regexes by grep fixed=TRUEpaul-shannon authored on 03/10/2017 18:13:41 |
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motif/TF mapping sources now case insensitivepaul-shannon authored on 26/09/2017 20:09:39 |
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Fixed jaspar format spacing and updated DESCRIPTIONMatthew Richards authored on 18/09/2017 18:31:33 |
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now annotates to TFs properly for MotifDb and TFClass sourcespaul-shannon authored on 12/09/2017 20:20:46 |
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geneToMotif, motifToGene, associateTranscriptionFactors testedpaul-shannon authored on 07/09/2017 23:28:23 |
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roughed in data, methods and tests for mapping tf genes <--> motifspaul-shannon authored on 13/08/2017 00:19:12 |
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View 8ff7379
Updated unit tests to accomodate added motifsMatthew Richards authored on 01/08/2017 16:44:49 |
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View fa5fbc9
Fixed 2 of 6 failing unit testsMatthew Richards authored on 01/08/2017 00:26:44 |
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Added jaspar output format and unit testsMatthew Richards authored on 15/06/2017 22:50:54 |
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in test.geneIdsAndTypes, typeCounts are now checked against minima, rather than absolute counts, hopting to make these tests robust against future additions to the datap.shannon authored on 28/08/2015 20:43:22 |
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expanded to top=50 rtahern top=5 in call to motifMatch, to ensure the search target is returned. this accomodates the peculiar fact MotIV's match algorithm and results differs on linux and macosp.shannon authored on 28/08/2015 20:40:02 |