| ... | ... |
@@ -1,8 +1,8 @@ |
| 1 | 1 |
Package: MotifDb |
| 2 | 2 |
Type: Package |
| 3 | 3 |
Title: An Annotated Collection of Protein-DNA Binding Sequence Motifs |
| 4 |
-Version: 1.35.5 |
|
| 5 |
-Date: 2021-09-01 |
|
| 4 |
+Version: 1.35.6 |
|
| 5 |
+Date: 2021-10-03 |
|
| 6 | 6 |
Author: Paul Shannon, Matt Richards |
| 7 | 7 |
Maintainer: Paul Shannon <pshannon@systemsbiology.org> |
| 8 | 8 |
Depends: R (>= 3.5.0), methods, BiocGenerics, S4Vectors, IRanges, GenomicRanges, Biostrings |
| ... | ... |
@@ -13,6 +13,7 @@ MotifDb <- NULL |
| 13 | 13 |
for(data.file in data.files) {
|
| 14 | 14 |
# define these to keep 'check' happy. they are loaded by 'load' |
| 15 | 15 |
tbl.md = NA; matrices = NA; |
| 16 |
+ # print(noquote(sprintf("--- about to load and append from file '%s'", data.file)))
|
|
| 16 | 17 |
variables = load(data.file) |
| 17 | 18 |
mdb = append(mdb, MotifList(matrices, tbl.md)) |
| 18 | 19 |
if(!quiet) |
| ... | ... |
@@ -1,15 +1,4 @@ |
| 1 |
-quick: install |
|
| 2 |
- |
|
| 3 |
-all: install vig build check |
|
| 4 |
- |
|
| 5 |
-vig: |
|
| 6 |
- R -e "devtools::build_vignettes()" |
|
| 7 |
- |
|
| 8 |
-build: |
|
| 9 |
- (cd ..; R CMD build --no-build-vignettes MotifDb) |
|
| 10 |
- |
|
| 11 |
-install: |
|
| 12 |
- (cd ..; R CMD INSTALL --no-test-load MotifDb) |
|
| 1 |
+oMotifDb) |
|
| 13 | 2 |
|
| 14 | 3 |
check: build |
| 15 | 4 |
(cd ..; R CMD check --no-manual --no-build-vignettes --ignore-vignettes `ls -t MotifDb_* | head -1`) |
