Browse code

fixed onload error, moved tfs RData file to tfs directory

paul-shannon authored on 03/10/2021 15:37:53
Showing4 changed files

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@@ -1,8 +1,8 @@
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 Package: MotifDb
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 Type: Package
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 Title: An Annotated Collection of Protein-DNA Binding Sequence Motifs
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-Version: 1.35.5
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-Date: 2021-09-01
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+Version: 1.35.6
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+Date: 2021-10-03
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 Author: Paul Shannon, Matt Richards
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 Maintainer: Paul Shannon <pshannon@systemsbiology.org>
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 Depends: R (>= 3.5.0), methods, BiocGenerics, S4Vectors, IRanges, GenomicRanges, Biostrings
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@@ -13,6 +13,7 @@ MotifDb <- NULL
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     for(data.file in data.files) {
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        # define these to keep 'check' happy.  they are loaded by 'load'
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       tbl.md = NA; matrices = NA;
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+      # print(noquote(sprintf("--- about to load and append from file '%s'", data.file)))
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       variables = load(data.file)
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       mdb = append(mdb, MotifList(matrices, tbl.md))
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       if(!quiet)
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@@ -1,15 +1,4 @@
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-quick: install
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-
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-all:  install vig build check
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-
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-vig:
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-	R -e "devtools::build_vignettes()"
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-
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-build:
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-	(cd ..; R CMD build --no-build-vignettes MotifDb)
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-
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-install:
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-	(cd ..; R CMD INSTALL --no-test-load MotifDb)
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+oMotifDb)
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 check: build
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 	(cd ..; R CMD check --no-manual --no-build-vignettes --ignore-vignettes `ls -t MotifDb_* | head -1`)
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similarity index 100%
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rename from inst/extdata/tfs-1683-lambert.RData
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rename to inst/extdata/tfs/tfs-1683-lambert.RData