| ... | ... |
@@ -1,3 +1,20 @@ |
| 1 |
+CHANGES IN VERSION 1.20 |
|
| 2 |
+----------------------- |
|
| 3 |
+ |
|
| 4 |
+NEW FEATURES |
|
| 5 |
+ |
|
| 6 |
+ o Now 13 sources, 52 organisms and 8369 motifs |
|
| 7 |
+ |
|
| 8 |
+ o New sources: HOCOMOCOv10, HOMER, jaspar2016, SwissRegulon |
|
| 9 |
+ |
|
| 10 |
+ o New methods: motifToGene, geneToMotif, associateTranscriptionFactors |
|
| 11 |
+ |
|
| 12 |
+SIGNIFICANT USER-VISIBLE CHANGES |
|
| 13 |
+ |
|
| 14 |
+ o The new methods mentioned above provide both strict and permissive |
|
| 15 |
+ mapping from motifs to their cognate transcription factors, thus |
|
| 16 |
+ supporting reproducible regulatory network construction. |
|
| 17 |
+ |
|
| 1 | 18 |
CHANGES IN VERSION 1.5.9 |
| 2 | 19 |
------------------------- |
| 3 | 20 |
|
| ... | ... |
@@ -10,7 +27,7 @@ CHANGES IN VERSION 1.1.3 |
| 10 | 27 |
|
| 11 | 28 |
NEW FEATURES |
| 12 | 29 |
|
| 13 |
- o 683 new motifs derived from DGF (digital genome footprinting) |
|
| 30 |
+ o 683 new motifs derived from DGF (digital genome footprinting) |
|
| 14 | 31 |
from the stamlab (http://www.stamlab.org/) added. Each is |
| 15 | 32 |
identified as either 'knownMotif' or 'novelMotif' |
| 16 | 33 |
|
