Browse code

updated for release

paul-shannon authored on 13/10/2017 16:41:24
Showing1 changed files

  • NEWS index adb0e98..f424ee5 100644
... ...
@@ -1,3 +1,20 @@
1
+CHANGES IN VERSION 1.20
2
+-----------------------
3
+
4
+NEW FEATURES
5
+
6
+     o Now 13 sources, 52 organisms and 8369 motifs
7
+
8
+     o New sources: HOCOMOCOv10, HOMER, jaspar2016, SwissRegulon
9
+
10
+     o New methods: motifToGene, geneToMotif, associateTranscriptionFactors
11
+
12
+SIGNIFICANT USER-VISIBLE CHANGES
13
+
14
+     o The new methods mentioned above provide both strict and permissive
15
+       mapping from motifs to their cognate transcription factors, thus
16
+       supporting reproducible regulatory network construction.
17
+
1 18
 CHANGES IN VERSION 1.5.9
2 19
 -------------------------
3 20
 
... ...
@@ -10,7 +27,7 @@ CHANGES IN VERSION 1.1.3
10 27
 
11 28
 NEW FEATURES
12 29
 
13
-    o 683 new motifs derived from DGF (digital genome footprinting) 
30
+    o 683 new motifs derived from DGF (digital genome footprinting)
14 31
       from the stamlab (http://www.stamlab.org/) added.  Each is
15 32
       identified as either 'knownMotif' or 'novelMotif'
16 33