Graph of MoonlightR
  • *
  • *
  • *
  • |\
  • | *
  • |/
  • | *
  • | *
  • | *
  • | *
  • | *
  • * |
  • |\ \
  • | * \
  • | |\ \
  • * | | |
  • |\| | |
  • | * | |
  • | * | |
  • | |\ \ \
  • | |/ / /
  • |/| | |
  • * | | |
  • |\ \ \ \
  • | * | | |
  • | | * | |
  • | | |\ \ \
  • | |_|/ / /
  • |/| | | |
  • * | | | |
  • |\ \ \ \ \
  • | * | | | |
  • |/ / / / /
  • | * | | |
  • | * | | |
  • |/ / / /
  • | | * /
  • | | |/
  • | | *
  • * | |
  • * | |
  • | | *
  • | | *
  • | |/
  • | *
  • |/|
  • * |
  • |\ \
  • | * |
  • | * |
  • |/ /
  • | *
  • | *
  • |/
  • *
  • |\
  • | *
  • | *
  • | *
  • |/
  • *
  • |\
  • * \
  • |\ \
  • | * |
  • | * |
  • | * |
  • | * |
  • | * |
  • | * |
  • | | *
  • | * |
  • |/ /
  • | *
  • | *
  • | *
  • * |
  • |\ \
  • * \ \
  • |\ \ \
  • | | | *
  • | | | *
  • | | * |
  • | |/ /
  • |/| |
  • | * |
  • |/ /
  • | *
  • | *
  • * |
  • |/
  • | *
  • |/
  • *
  • *
  • |\
  • * |
  • * |
  • | *
  • | *
  • | *
  • |/|
  • * |
  • * |
  • |\ \
  • * | |
  • | | *
  • | | *
  • | |/
  • | | *
  • | |/
  • | *
  • | |\
  • | * |
  • |/ /
  • * |
  • * |
  • | *
  • | *
  • * |
  • * |
  • * |
  • * |
  • * |
  • * |
  • |\ \
  • * | |
  • | | *
  • | | *
  • | * |
  • |/ /
  • * |
  • * |
  • * |
  • * |
  • * |
  • * |
  • | *
  • |/
  • | *
  • | *
  • | *
  • * |
  • 68e15e7 (HEAD -> devel, origin/master, origin/devel, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 10:53:29 -0400;
  • 7dada82 (origin/RELEASE_3_18, RELEASE_3_18) bump x.y.z version to even y prior to creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 10:53:29 -0400;
  • 29c4f6a Merge pull request <a href="#29">#29</a> from ELELAB/fix28_versioning_in_news by Matteo Tiberti <matteo.tiberti@gmail.com> 2023-08-03 14:59:42 +0200;
  • 1b8662f changed versioning by Matteo Tiberti <matteo.tiberti@gmail.com> 2023-08-03 14:58:53 +0200;
  • ad4dec3 (origin/RELEASE_3_17, RELEASE_3_17) updated NEWS file by Matteo Tiberti <matteo.tiberti@gmail.com> 2023-08-03 14:48:40 +0200;
  • 0fe99ca version bump by Matteo Tiberti <matteo.tiberti@gmail.com> 2023-08-03 14:47:32 +0200;
  • be5795b removed legacy argument in TCGA download by Mona <mona@kb-bioinfo01.cancer.dk> 2023-07-05 20:01:44 +0200;
  • 490370b updated arguments in GDCquery for TCGA data download by Mona <mona@kb-bioinfo01.cancer.dk> 2023-07-05 21:50:40 +0200;
  • 9ecaa37 added edgeR in DESCRIPTION file by Mona <mona@kb-bioinfo01.cancer.dk> 2023-07-05 23:50:55 +0200;
  • e39659b Merge pull request <a href="#27">#27</a> from ELELAB/fix25_version_realign by Matteo Tiberti <matteo.tiberti@gmail.com> 2023-08-03 14:30:46 +0200;
  • 0592356 Merge remote-tracking branch 'upstream/devel' into fix25_version_realign by Matteo Tiberti <matteo.tiberti@gmail.com> 2023-08-03 14:29:50 +0200;
  • a81a537 Merge pull request <a href="#26">#26</a> from ELELAB/fix25_version_realign by Matteo Tiberti <matteo.tiberti@gmail.com> 2023-08-03 14:28:48 +0200;
  • 78fb8a3 realigned version with bioconductor remote devel by Matteo Tiberti <matteo.tiberti@gmail.com> 2023-08-03 14:27:39 +0200;
  • af87ea0 Merge branch 'master' of https://github.com/ELELAB/MoonlightR by Matteo Tiberti <matteo.tiberti@gmail.com> 2023-08-03 12:51:17 +0200;
  • ba6ef6a Merge pull request <a href="#23">#23</a> from ELELAB/fix19_warnings_bioc3.17 by Matteo Tiberti <matteo.tiberti@gmail.com> 2023-08-03 12:51:05 +0200;
  • abad456 version bump by Matteo Tiberti <matteo.tiberti@gmail.com> 2023-08-03 12:50:07 +0200;
  • 99df711 Merge branch 'master' of https://github.com/ELELAB/MoonlightR by Matteo Tiberti <matteo.tiberti@gmail.com> 2023-08-03 12:43:45 +0200;
  • f4a0f89 Merge pull request <a href="#24">#24</a> from ELELAB/fix20_error_edgeR_bioc3.17 by Matteo Tiberti <matteo.tiberti@gmail.com> 2023-08-03 12:37:54 +0200;
  • 6d6bc4f added edgeR in DESCRIPTION file by Mona <mona@kb-bioinfo01.cancer.dk> 2023-07-05 23:50:55 +0200;
  • 5242fc0 updated arguments in GDCquery for TCGA data download by Mona <mona@kb-bioinfo01.cancer.dk> 2023-07-05 21:50:40 +0200;
  • 93b13e2 removed legacy argument in TCGA download by Mona <mona@kb-bioinfo01.cancer.dk> 2023-07-05 20:01:44 +0200;
  • 03b47c4 bump x.y.z version to odd y following creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 10:50:22 -0400;
  • 9374e8c bump x.y.z version to even y prior to creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 10:50:22 -0400;
  • 1fd48bd Update README.md by elenapapaleo <elena.papaleo.78@gmail.com> 2022-11-17 17:56:57 +0100;
  • 8242b38 Update README.md by elenapapaleo <elena.papaleo.78@gmail.com> 2022-11-17 17:56:28 +0100;
  • 48b0417 bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:14:39 -0400;
  • 4135c48 (origin/RELEASE_3_16, RELEASE_3_16) bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:14:39 -0400;
  • adb123a Merge branch 'master' of git.bioconductor.org:packages/MoonlightR by Matteo Tiberti <matteo.tiberti@gmail.com> 2022-10-11 16:07:44 +0200;
  • 86152a4 Merge pull request <a href="#18">#18</a> from ELELAB/fix17_bioc3.16 by Matteo Tiberti <matteo.tiberti@gmail.com> 2022-10-11 10:23:03 +0200;
  • 136e996 version bump by Matteo Tiberti <matteo.tiberti@gmail.com> 2022-10-11 10:22:02 +0200;
  • 2c69a75 loaded dbplyr prior to load all packages by Mona <mona@kb-bioinfo01.cancer.dk> 2022-10-11 09:53:19 +0200;
  • 9812429 bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:36:38 +0000;
  • 07263ff (origin/RELEASE_3_15, RELEASE_3_15) bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:36:38 +0000;
  • 62d2516 Merge pull request <a href="#12">#12</a> from ELELAB/fix011_documentation_warnings by Matteo Tiberti <matteo.tiberti@gmail.com> 2022-03-31 17:41:58 +0200;
  • b8e1b45 version bump by Matteo Tiberti <matteo.tiberti@gmail.com> 2022-03-31 17:31:16 +0200;
  • 834f682 changed description with a more comprehensive one by Matteo Tiberti <matteo.tiberti@gmail.com> 2022-03-31 17:31:00 +0200;
  • fc290a0 Fixed minor documentation issues by Astrid Saksager <astridsaksager@gmail.com> 2022-03-30 15:33:17 +0200;
  • f32b3c2 Merge remote-tracking branch 'upstream/master' by Matteo Tiberti <matteo.tiberti@gmail.com> 2022-03-21 09:35:21 +0100;
  • c01f992 Merge pull request <a href="#9">#9</a> from ELELAB/fix3_update_citation by Matteo Tiberti <matteo.tiberti@gmail.com> 2022-03-21 09:24:59 +0100;
  • 970365c removed manual fields as recommended by BiocCheck by Matteo Tiberti <matteo.tiberti@gmail.com> 2022-03-21 09:16:12 +0100;
  • c24c41e modified Author field with missing names by Matteo Tiberti <matteo.tiberti@gmail.com> 2022-03-21 08:51:40 +0100;
  • a8859bd added missing quotes by Matteo Tiberti <matteo.tiberti@gmail.com> 2022-03-18 12:34:42 +0100;
  • 9682bd5 changed authors list in DESCRIPTION by Matteo Tiberti <matteo.tiberti@gmail.com> 2022-03-18 12:29:39 +0100;
  • 730723b version bump by Matteo Tiberti <matteo.tiberti@gmail.com> 2022-03-18 09:29:24 +0100;
  • d8994b9 updated .Rbuildignore to include Docker files by Matteo Tiberti <matteo.tiberti@gmail.com> 2022-03-18 08:57:38 +0100;
  • cff0be0 undeprecate by lshep <lori.shepherd@roswellpark.org> 2022-03-14 07:47:52 -0400;
  • 166b695 Updating citation file by Mona <mona@kb-bioinfo01.cancer.dk> 2022-02-18 12:26:18 +0100;
  • 26b9f61 Deprecation by lshep <lori.shepherd@roswellpark.org> 2021-11-15 13:36:36 -0500;
  • 8e17a72 bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:30:46 +0000;
  • 3854c2d (origin/RELEASE_3_14, RELEASE_3_14) bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:30:46 +0000;
  • c4be2ef Merge pull request <a href="#8">#8</a> from ELELAB/fix6_FEA by Antonio Colaprico <antonio.colaprico@gmail.com> 2021-07-07 12:50:45 -0400;
  • 7188b3f Merge pull request <a href="#7">#7</a> from ELELAB/fix5_plotFEA by Antonio Colaprico <antonio.colaprico@gmail.com> 2021-07-07 12:48:09 -0400;
  • 0af3ca9 bump x.y.z version to odd y following creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:23:48 +0000;
  • d01eece (origin/RELEASE_3_13, RELEASE_3_13) bump x.y.z version to even y prior to creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:23:48 +0000;
  • 78108d3 Fixes switching names of biological processes by Mona <mona@kb-bioinfo01.cancer.dk> 2020-11-30 11:57:26 +0100;
  • 700dd7c Fixed plotting for FEA by Mona <mona@kb-bioinfo01.cancer.dk> 2020-11-06 11:15:56 +0100;
  • 4786526 bump x.y.z version to odd y following creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 11:18:38 -0400;
  • 69c53b7 (origin/RELEASE_3_12, RELEASE_3_12) bump x.y.z version to even y prior to creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 11:18:38 -0400;
  • e813e8f Update RoxygenNote by Antonio Colaprico <antonio.colaprico@gmail.com> 2020-07-10 11:58:51 -0400;
  • 2e5f494 (origin/RELEASE_3_11, RELEASE_3_11) Update Description 1.14.1 by Antonio Colaprico <antonio.colaprico@gmail.com> 2020-07-08 15:40:46 -0400;
  • 2919407 Update description 1.15.1 by Antonio Colaprico <antonio.colaprico@gmail.com> 2020-07-08 12:29:42 -0400;
  • 6eb4308 Merge remote-tracking branch 'upstream/master' by Antonio Colaprico <antonio.colaprico@gmail.com> 2020-07-08 12:25:04 -0400;
  • f12f41c Update Description by Antonio Colaprico <antonio.colaprico@gmail.com> 2020-07-08 12:18:33 -0400;
  • a489f36 Update NAMESPACE TCGAanalyze_DMR by Antonio Colaprico <antonio.colaprico@gmail.com> 2020-05-15 16:49:04 -0400;
  • 822d65a bump x.y.z version to odd y following creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 19:02:45 +0000;
  • e86cda1 bump x.y.z version to even y prior to creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 19:02:45 +0000;
  • fe2e74c Merge remote-tracking branch 'upstream/master' by Antonio <axc1833@med.miami.edu> 2020-01-29 15:59:25 -0500;
  • 1c615d2 Update DPA.R by Antonio Colaprico <antonio.colaprico@gmail.com> 2020-01-10 10:35:25 -0500;
  • e7f2e9e Merge branch 'master' of https://github.com/ibsquare/MoonlightR by Antonio Colaprico <antonio.colaprico@gmail.com> 2020-01-10 10:33:57 -0500;
  • a240321 update vignette v1 by Antonio Colaprico <antonio.colaprico@gmail.com> 2020-01-10 10:33:43 -0500;
  • 7d44983 bump x.y.z version to odd y after creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:42:09 -0400;
  • f6cce34 (origin/RELEASE_3_10, RELEASE_3_10) bump x.y.z version to even y prior to creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:10:11 -0400;
  • 3bb845f (origin/RELEASE_3_9, RELEASE_3_9) merge devel by Antonio Colaprico <antonio.colaprico@gmail.com> 2019-10-10 10:09:31 -0400;
  • 31757b6 update 2019 july 2 by Antonio Colaprico <antonio.colaprico@gmail.com> 2019-07-12 15:51:33 -0400;
  • 7cded2f update 2019 july by Antonio Colaprico <antonio.colaprico@gmail.com> 2019-07-12 15:48:31 -0400;
  • 10f011b fix in DPA by Antonio Colaprico <antonio.colaprico@gmail.com> 2019-05-20 15:38:39 -0400;
  • b882da5 update version 1.10.1 by Antonio Colaprico <antonio.colaprico@gmail.com> 2019-05-06 10:18:32 -0400;
  • ecc64a8 bump x.y.z versions to odd y after creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 12:13:58 -0400;
  • 2baa63e bump x.y.z versions to even y prior to creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 11:54:04 -0400;
  • e226ae9 Remove set.seed usage in R code part2 by Antonio Colaprico <antonio.colaprico@gmail.com> 2019-05-02 10:54:57 -0400;
  • 5e1ea7b Remove set.seed usage in R code by Antonio Colaprico <antonio.colaprico@gmail.com> 2019-05-02 10:50:16 -0400;
  • c5ee52e fix part2 by Antonio Colaprico <antonio.colaprico@gmail.com> 2019-05-02 10:38:36 -0400;
  • 5e5cfe8 fixing errors warning notes by Antonio Colaprico <antonio.colaprico@gmail.com> 2019-05-02 09:49:04 -0400;
  • 453e007 Removing LPA from vignette by Antonio Colaprico <antonio.colaprico@gmail.com> 2019-05-02 09:33:02 -0400;
  • e761de1 Merge pull request <a href="#2">#2</a> from lwaldron/patch-1 by Antonio Colaprico <antonio.colaprico@gmail.com> 2019-05-02 09:10:54 -0400;
  • 45a0dc2 removing pdf by Antonio Colaprico <antonio.colaprico@gmail.com> 2019-05-02 09:09:23 -0400;
  • 259f625 bump x.y.z versions to odd y after creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:54:36 -0400;
  • 5a26351 (origin/RELEASE_3_8, RELEASE_3_8) bump x.y.z versions to even y prior to creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:42:02 -0400;
  • a2b632e Correct GitHub links in DESCRIPTION by Levi Waldron <lwaldron.research@gmail.com> 2018-10-10 13:50:22 -0400;
  • c433fc6 Update Description and Readme by Antonio Colaprico <antonio.colaprico@gmail.com> 2018-10-01 16:15:26 -0400;
  • 0f36006 Update with functions and documentation by Antonio Colaprico <antonio.colaprico@gmail.com> 2018-10-01 16:06:54 -0400;
  • 3e14915 improve FEA table by Antonio Colaprico <antonio.colaprico@gmail.com> 2018-09-13 10:22:47 -0400;
  • 2cae696 FEA update 2 by Antonio Colaprico <antonio.colaprico@gmail.com> 2018-09-13 10:15:46 -0400;
  • 0340d22 FEA and plotFEA update by Antonio Colaprico <antonio.colaprico@gmail.com> 2018-09-13 10:09:34 -0400;
  • 4300848 DiseaseList update by Antonio Colaprico <antonio.colaprico@gmail.com> 2018-09-13 10:01:01 -0400;
  • 9d7d1ba replace BiocInstaller biocLite mentions with BiocManager by LiNk-NY <mramos09@gmail.com> 2018-08-30 13:52:34 -0400;
  • d0b4b44 (origin/RELEASE_3_7, RELEASE_3_7) fix error DOSE by colsen <colsen@ulb.ac.be> 2018-05-25 16:57:37 +0200;
  • 27aac18 resolve versioning error in release by colsen <colsen@ulb.ac.be> 2018-05-25 16:50:35 +0200;
  • 2927c0b resolve merge conflight by colsen <colsen@ulb.ac.be> 2018-05-22 14:47:20 +0200;
  • 6d25846 version bump by colsen <colsen@ulb.ac.be> 2018-05-22 14:47:20 +0200;