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  • 1062666 (HEAD -> master, origin/master, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:07:52 -0400;
  • 4d1fbc6 (origin/RELEASE_3_16, RELEASE_3_16) bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:07:52 -0400;
  • a24c22f (origin/RELEASE_3_15, RELEASE_3_15) correct version by Anne Biton <anne.biton@gmail.com> 2022-09-07 16:53:07 -0700;
  • 43678d2 correct version by Anne Biton <anne.biton@gmail.com> 2022-09-07 16:53:07 -0700;
  • 2bd90f1 remove require(GOstats) and negative weights in call to function layout.fruchterman.reingold by Anne Biton <anne.biton@gmail.com> 2022-09-07 16:53:07 -0700;
  • c68591d bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:13:35 +0000;
  • 7c6b12c bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:13:35 +0000;
  • 7293f30 bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:06:44 +0000;
  • 602994d (origin/RELEASE_3_14, RELEASE_3_14) bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:06:44 +0000;
  • 264a958 bump x.y.z version to odd y following creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 15:57:33 +0000;
  • def84c7 (origin/RELEASE_3_13, RELEASE_3_13) bump x.y.z version to even y prior to creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 15:57:33 +0000;
  • ac307d8 bump x.y.z version to odd y following creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 10:49:15 -0400;
  • 136dd69 (origin/RELEASE_3_12, RELEASE_3_12) bump x.y.z version to even y prior to creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 10:49:15 -0400;
  • 2623e7c bump x.y.z version to odd y following creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 18:33:06 +0000;
  • 234dd72 (origin/RELEASE_3_11, RELEASE_3_11) bump x.y.z version to even y prior to creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 18:33:06 +0000;
  • 863b53a resolve Windows warnings occuring in the build 'file link 'MineICAParams-class' in package 'MineICA' does not exist and so has been treated as a topic' by Anne Biton <anne.biton@gmail.com> 2020-04-23 20:30:14 +0200;
  • 18d6dc5 (origin/RELEASE_3_10) replace wrong use of parallal foreach in function clusterFastICARuns by future_lapply or lapply by Anne Biton <anne.biton@gmail.com> 2020-04-09 11:43:12 +0200;
  • 3bde731 replace wrong use of parallal foreach in function clusterFastICARuns by future_lapply or lapply by Anne Biton <anne.biton@gmail.com> 2020-04-09 11:43:12 +0200;
  • c559995 bump x.y.z version to odd y after creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:36:34 -0400;
  • a0e7145 bump x.y.z version to even y prior to creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:08:37 -0400;
  • 6a6c43a bump x.y.z versions to odd y after creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 12:11:20 -0400;
  • 9af1f8e (origin/RELEASE_3_9, RELEASE_3_9) bump x.y.z versions to even y prior to creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 11:53:40 -0400;
  • 2a1745a bump x.y.z versions to odd y after creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:54:31 -0400;
  • 7e79aff (origin/RELEASE_3_8, RELEASE_3_8) bump x.y.z versions to even y prior to creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:41:50 -0400;
  • cf8c827 bump x.y.z versions to odd y after creation of RELEASE_3_7 branch by vobencha <valerie.obenchain@roswellpark.org> 2018-04-30 10:41:39 -0400;
  • b4a1fce (origin/RELEASE_3_7, RELEASE_3_7) bump x.y.z versions to even y prior to creation of RELEASE_3_7 branch by vobencha <valerie.obenchain@roswellpark.org> 2018-04-30 10:35:29 -0400;
  • 46cf2fa bump x.y.z versions to odd y after creation of RELEASE_3_6 branch by Hervé Pagès <hpages@fredhutch.org> 2017-10-30 12:52:41 -0400;
  • 5b32c0b (origin/RELEASE_3_6, RELEASE_3_6) bump x.y.z versions to even y prior to creation of RELEASE_3_6 branch by Hervé Pagès <hpages@fredhutch.org> 2017-10-30 12:39:59 -0400;
  • 0ffd590 bump x.y.z versions to odd y after creation of 3_5 branch by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:50:57 +0000;
  • 479cb9e (origin/RELEASE_3_5, RELEASE_3_5) Creating branch for BioC 3.5 release by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:45:44 +0000;
  • 7ecb615 bump x.y.z versions to even y prior to creation of 3_5 branch by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:25:24 +0000;
  • 771e40a bump x.y.z versions to odd 'y' after creation of 3_4 branch by Herve Pages <hpages@fhcrc.org> 2016-10-17 19:10:43 +0000;
  • 346473f (origin/RELEASE_3_4, RELEASE_3_4) Creating branch for BioC 3.4 release by Herve Pages <hpages@fhcrc.org> 2016-10-17 19:00:47 +0000;
  • ddb5ea0 bump x.y.z versions to even 'y' prior to creation of 3_4 branch by Herve Pages <hpages@fhcrc.org> 2016-10-17 18:45:06 +0000;
  • a852c68 bump version after creating 3.3 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2016-05-03 21:30:44 +0000;
  • 4d36910 (origin/RELEASE_3_3, RELEASE_3_3) Creating branch for BioC 3.3 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2016-05-03 21:26:31 +0000;
  • 855b642 Bump versions prior to creation of 3.3 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2016-05-03 21:20:18 +0000;
  • 91b9e03 Bumped version number of all packages after creation of 3.2 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-10-13 19:59:53 +0000;
  • 6beb606 (origin/RELEASE_3_2, RELEASE_3_2) Creating branch for BioC 3.2 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-10-13 19:57:33 +0000;
  • bf7ef97 Bumped versions of all packages prior to creating 3.2 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-10-13 19:36:05 +0000;
  • 7ddc075 Bump versions in trunk after creation of 3.1 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-04-16 20:02:44 +0000;
  • 81c2a77 (origin/RELEASE_3_1, RELEASE_3_1) Creating branch for BioC 3.1 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-04-16 20:00:01 +0000;
  • 4926a0c Bump versions prior to creating 3.1 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-04-16 19:42:01 +0000;
  • 338c068 oops, forgot to import(BiocGenerics) by Herve Pages <hpages@fhcrc.org> 2015-03-19 17:51:53 +0000;
  • 6d16c1d Remove locally defined "organism" and "organism<-" generics (the former was actually defined twice) and import BiocGenerics so the locally defined methods get attached to the new "organism" and "organism<-" generics from BiocGenerics. Also remove the "getOrganism" and "setOrganism" generics and methods. They were (a) not exported (even though the class-IcaSet.Rd man pages contained aliases for them), (b) not used internally, and (c) redundant with the "organism" and "organism<-" methods. by Herve Pages <hpages@fhcrc.org> 2015-03-19 00:33:15 +0000;
  • 19b62f6 Bumping versions after creating 3.0 release branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-10-13 21:47:41 +0000;
  • 8d38a2f (origin/RELEASE_3_0) Creating branch for BioC 3.0 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-10-13 21:46:02 +0000;
  • 0bff200 Bump package versions prior to creating the 3.0 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-10-13 21:38:33 +0000;
  • 52e3a3f biocViews update by Sonali Arora <sarora@fhcrc.org> 2014-06-10 23:34:33 +0000;
  • 4fc0f6c Second version bump after creating 2.14 release branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-04-11 21:21:21 +0000;
  • 040bd64 (origin/RELEASE_2_14, RELEASE_2_14) Creating 2.14 release branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-04-11 21:17:46 +0000;
  • 16907cc First version bump prior to creating 2.14 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2014-04-11 21:07:21 +0000;
  • 45bf2e0 modify to new biocViews to DESCRIPTION file by Sonali Arora <sarora@fhcrc.org> 2014-03-04 22:12:21 +0000;
  • 3a59cca (origin/RELEASE_2_13, RELEASE_2_13) Bump version because of vignette change. by Anne Biton <anne.biton@gmail.com> 2013-12-13 00:05:00 +0000;
  • 93b974a Change vignette due to change of FastICA package that returns components in a different order. by Anne Biton <anne.biton@gmail.com> 2013-12-13 00:01:21 +0000;
  • 51a1cb5 change maintaner in description file by Anne Biton <anne.biton@gmail.com> 2013-12-11 18:44:24 +0000;
  • 7c2c439 commit DESCRIPTION by Anne Biton <anne.biton@gmail.com> 2013-12-10 00:36:02 +0000;
  • 7dc141d Merged r83955 from trunk. by Anne Biton <anne.biton@gmail.com> 2013-12-05 20:40:01 +0000;
  • 3965c71 Correction of the vignette. Made sure breaks are taken into accounts in heatmap.plus function. by Anne Biton <anne.biton@gmail.com> 2013-12-05 20:29:39 +0000;
  • f134765 Bump version number after correction of the vignette. by Anne Biton <anne.biton@gmail.com> 2013-12-03 02:47:21 +0000;
  • a6ab683 Sample commit by Anne Biton <anne.biton@gmail.com> 2013-12-03 02:18:51 +0000;
  • f3bb072 bump version after release branch has been created by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-10-14 21:47:19 +0000;
  • 27ba3e3 Creating branch for BioC 2.13 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-10-14 21:43:43 +0000;
  • dfbe248 bump versions prior to creating BioC 2.13 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-10-14 21:29:21 +0000;
  • b10fe98 geom_jitter was used to superimpose points on boxplots (when 'addPoints = TRUE' in function qualVarAnalysis) by Anne Biton <anne.biton@gmail.com> 2013-08-28 18:26:23 +0000;
  • a9670cd Bump y in version x.y.z to odd number in devel by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-04-03 22:06:11 +0000;
  • 4d018eb (origin/RELEASE_2_12, RELEASE_2_12) Creating branch for BioC 2.12 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-04-03 21:56:22 +0000;
  • 6b2e88d bump y of x.y.z version number for BioC 2.12 release by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-04-03 21:32:27 +0000;
  • 40aecbc add maintainer name to Maintainer field by Dan Tenenbaum <dtenenba@fhcrc.org> 2013-03-18 17:58:38 +0000;
  • 5559282 Update version numbering from 0.1.0 to 0.99.1, remove three help files of data not available in the package anymore. by Anne Biton <anne.biton@gmail.com> 2013-03-16 19:22:39 +0000;
  • 14753e6 Adds MineICA, SomatiCA and lpNet to the repos. by Marc Carlson <mcarlson@fhcrc.org> 2013-02-05 22:15:53 +0000;