Browse code

Adds MineICA, SomatiCA and lpNet to the repos.

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/MineICA@73179 bc3139a8-67e5-0310-9ffc-ced21a209358

Marc Carlson authored on 05/02/2013 22:15:53
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+\docType{data}
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+\name{icaSetKim}
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+\alias{icaSetKim}
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+\title{IcaSet-object containing a FastICA decomposition of gene expression microarrray-based data of bladder cancer samples.}
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+\description{
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+  Object of class \code{\link{IcaSet}} containing an ICA
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+  decomposition calculated by the FastICA algorithm
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+  (through matlab function "icasso") on bladder cancer
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+  expression data measured on illumina Human-6 BeadChip,
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+  version 2. It contains 20 independent components. The
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+  original expression data contain 165 tumor samples, were
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+  normalized by the authors of the paper with Illumina
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+  BeadStudio software using Quantile normalization and log2
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+  transformation, and are restricted to the 10000 most
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+  variable probe sets.
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+}
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+\author{
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+  Anne
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+}
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+\references{
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+  \url{http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE13507}
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+}
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+\keyword{datasets}
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+