Adds MineICA, SomatiCA and lpNet to the repos.

git-svn-id: file:///home/git/hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/MineICA@73179 bc3139a8-67e5-0310-9ffc-ced21a209358

Marc Carlson authored on 05/02/2013 22:15:53
Showing 1 changed files
 1 1 new file mode 100644 ... ... @@ -0,0 +1,40 @@ 1 +\name{plotMclust} 2 +\alias{plotMclust} 3 +\title{Plots the Gaussian fitted by \code{\link[mclust]{Mclust}}} 4 +\usage{ 5 + plotMclust(mc, data) 6 +} 7 +\arguments{ 8 + \item{mc}{The result of Mclust function applied to 9 + argument \code{data}} 10 + 11 + \item{data}{The vector of numeric values on which was 12 + applied Mclust} 13 +} 14 +\value{ 15 + NULL 16 +} 17 +\description{ 18 + Given a result of function Mclust applied on a numeric 19 + vector, this function add the fitted Gaussian to a 20 + previous plot. This is an internal function called by 21 + \code{plotPosSamplesInComp}. 22 +} 23 +\details{ 24 + This function can only deal with at the most three 25 + Gaussian. 26 +} 27 +\examples{ 28 +## create a mix of two Gaussian 29 +v <-c(rnorm(80,mean=-0.5,sd=1),rnorm(80,mean=1,sd=0.2)) 30 +## apply Mclust 31 +mc <- Mclust(v) 32 +## plot fitted Gaussian on histogram of v 33 +hist(v, freq=FALSE) 34 +MineICA:::plotMclust(mc=mc,data=v) 35 +} 36 +\author{ 37 + Anne Biton 38 +} 39 +\keyword{internal} 40 +