useDynLib("MANOR", .registration=TRUE)

importFrom("GLAD", "arrayPlot", "arrayPlot.arrayCGH", 
           "ChrNumeric", "myPalette", "as.profileCGH")
importFrom("graphics", "abline", "plot", "points")
importFrom("grDevices", "bitmap", "dev.off", "rainbow")
importFrom("stats", "aggregate", "median", "na.omit", "predict",
           "quantile", "sd")
importFrom("utils", "data", "read.delim", "write.table")

exportPattern("^[[:alpha:]]+")
S3method(arrayTrend, arrayCGH)
S3method(arrayTrend, default)
S3method(detectSB, arrayCGH)
S3method(flag.summary, arrayCGH)
S3method(flag.summary, default)
S3method(genome.plot, arrayCGH)
S3method(genome.plot, default)
S3method(html.report, arrayCGH)
S3method(html.report, default)
S3method(nem, arrayCGH)
S3method(nem, default)
S3method(norm, arrayCGH)
S3method(print, flag)
S3method(report.plot, arrayCGH)
S3method(report.plot, default)
S3method(sort, arrayCGH)