1. IVAS
  2. Graph
Graph of IVAS
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  • 5e0a3d3 (HEAD -> devel, origin/master, origin/devel, origin/HEAD) bump x.y.z version to odd y following creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 10:41:17 -0400;
  • 1e105b2 (origin/RELEASE_3_18, RELEASE_3_18) bump x.y.z version to even y prior to creation of RELEASE_3_18 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2023-10-24 10:41:17 -0400;
  • 2c64e17 bump x.y.z version to odd y following creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 10:37:26 -0400;
  • e2f07a5 (origin/RELEASE_3_17, RELEASE_3_17) bump x.y.z version to even y prior to creation of RELEASE_3_17 branch by J Wokaty <jwokaty@users.noreply.github.com> 2023-04-25 10:37:26 -0400;
  • 48e6abc bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:11:02 -0400;
  • 64c905d (origin/RELEASE_3_16, RELEASE_3_16) bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:11:02 -0400;
  • 0d0d380 bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:23:37 +0000;
  • efada2b (origin/RELEASE_3_15, RELEASE_3_15) bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 15:23:37 +0000;
  • 0187e23 bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:18:38 +0000;
  • cb2ad75 (origin/RELEASE_3_14, RELEASE_3_14) bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 16:18:38 +0000;
  • 6919afd bump x.y.z version to odd y following creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:10:52 +0000;
  • 72bbdb6 (origin/RELEASE_3_13, RELEASE_3_13) bump x.y.z version to even y prior to creation of RELEASE_3_13 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-05-19 16:10:52 +0000;
  • a60cb45 bump x.y.z version to odd y following creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 11:02:14 -0400;
  • 5ca83c4 (origin/RELEASE_3_12, RELEASE_3_12) bump x.y.z version to even y prior to creation of RELEASE_3_12 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-10-27 11:02:14 -0400;
  • d2fa4f1 bump x.y.z version to odd y following creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 18:46:31 +0000;
  • cbcc1ba (origin/RELEASE_3_11, RELEASE_3_11) bump x.y.z version to even y prior to creation of RELEASE_3_11 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2020-04-27 18:46:31 +0000;
  • f963b1b bump x.y.z version to odd y after creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:38:53 -0400;
  • 52a1844 (origin/RELEASE_3_10, RELEASE_3_10) bump x.y.z version to even y prior to creation of RELEASE_3_10 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-10-29 13:09:08 -0400;
  • a8765fb bump x.y.z versions to odd y after creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 12:12:13 -0400;
  • f7a550c (origin/RELEASE_3_9, RELEASE_3_9) bump x.y.z versions to even y prior to creation of RELEASE_3_9 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2019-05-02 11:53:52 -0400;
  • 5339eb3 (origin/RELEASE_3_8, RELEASE_3_8) Add ImmunoOncology biocViews term by Kayla-Morrell <kayla.morrell@roswellpark.org> 2019-01-04 13:36:43 -0500;
  • 5121735 Add ImmunoOncology biocViews term by Kayla-Morrell <kayla.morrell@roswellpark.org> 2019-01-04 13:36:40 -0500;
  • e958aa7 bump x.y.z versions to odd y after creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:54:33 -0400;
  • 6e09f05 bump x.y.z versions to even y prior to creation of RELEASE_3_8 branch by vobencha <vobencha@gmail.com> 2018-10-30 11:41:56 -0400;
  • 0c8fb50 bump x.y.z versions to odd y after creation of RELEASE_3_7 branch by vobencha <valerie.obenchain@roswellpark.org> 2018-04-30 10:41:40 -0400;
  • 7878acf (origin/RELEASE_3_7, RELEASE_3_7) bump x.y.z versions to even y prior to creation of RELEASE_3_7 branch by vobencha <valerie.obenchain@roswellpark.org> 2018-04-30 10:35:35 -0400;
  • 5dd79c6 bump x.y.z versions to odd y after creation of RELEASE_3_6 branch by Hervé Pagès <hpages@fredhutch.org> 2017-10-30 12:54:03 -0400;
  • 91f8348 (origin/RELEASE_3_6, RELEASE_3_6) bump x.y.z versions to even y prior to creation of RELEASE_3_6 branch by Hervé Pagès <hpages@fredhutch.org> 2017-10-30 12:40:48 -0400;
  • eade999 bump x.y.z versions to odd y after creation of 3_5 branch by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:50:57 +0000;
  • 59fe33c (origin/RELEASE_3_5, RELEASE_3_5) Creating branch for BioC 3.5 release by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:45:44 +0000;
  • da6b3e6 bump x.y.z versions to even y prior to creation of 3_5 branch by Herve Pages <hpages@fhcrc.org> 2017-04-24 19:25:24 +0000;
  • 128d57a - Replace the foreach function to the bplapply function in BiocParallel by Seonggyun Han <hangost@ssu.ac.kr> 2017-04-07 04:53:57 +0000;
  • 89b98be - replace codes with foreach into BiocParallel in sQTLsFinder.R and Splicingfinder.R by Seonggyun Han <hangost@ssu.ac.kr> 2017-04-05 16:21:26 +0000;
  • ebc0c60 - Modifying sQTLsFinder.R, CalSigSNP.R - Modifying CITATION - Modifying saveBplot.Rd by Seonggyun Han <hangost@ssu.ac.kr> 2017-04-04 08:06:54 +0000;
  • 04d63d4 - Debugging sQTLsFinder.R by Seonggyun Han <hangost@ssu.ac.kr> 2017-04-03 02:05:10 +0000;
  • 520c204 - Debugging sQTLsFinder.R by Seonggyun Han <hangost@ssu.ac.kr> 2017-04-03 02:03:12 +0000;
  • 94ef987 - Debugging sQTLsFinder.R by Seonggyun Han <hangost@ssu.ac.kr> 2017-04-02 03:15:50 +0000;
  • 4aaf9a9 - Debugging sQTLsFinder.R by Seonggyun Han <hangost@ssu.ac.kr> 2017-03-30 21:18:21 +0000;
  • a6c7c48 - Modifying sQTLsFinder.R by Seonggyun Han <hangost@ssu.ac.kr> 2017-03-29 01:51:39 +0000;
  • d7570e0 - Modifying sQTLsFinder.R by Seonggyun Han <hangost@ssu.ac.kr> 2017-03-29 01:47:24 +0000;
  • a228360 - Modifying sQTLsFinder.R - add CITATION by Seonggyun Han <hangost@ssu.ac.kr> 2017-03-27 10:50:13 +0000;
  • ea216ce - Debugging the Splicingfinder.R function. by Seonggyun Han <hangost@ssu.ac.kr> 2017-03-20 07:44:04 +0000;
  • 42cd2d4 - Debugging the Splicingfinder.R and sQTLsFinder.R functions by Seonggyun Han <hangost@ssu.ac.kr> 2017-03-17 23:20:08 +0000;
  • a624aa4 Add CITATION by Seonggyun Han <hangost@ssu.ac.kr> 2017-03-14 22:07:24 +0000;
  • 61dbd2e Add CITATION Debugging sQTLsFinder.R by Seonggyun Han <hangost@ssu.ac.kr> 2017-03-14 22:05:39 +0000;
  • 4747f1b - Modify RatioFromFPKM, Splicingfinder, and sQTLsFinder - Modify manual and tutorial by Seonggyun Han <hangost@ssu.ac.kr> 2017-03-09 17:56:48 +0000;
  • 1a89ccf Add new functions and manuals by Seonggyun Han <hangost@ssu.ac.kr> 2017-03-01 10:10:33 +0000;
  • 1f9980c - Defunct MsqtlFinder, calSignificant, and sqtlfinder. - Adjust Chr names between GTF and SNP locus data. - Change test of UTR region. - sqtl finder reform - Create new functions (RatioFromFPKM, Splicingfinder, and sQTLFinder) - Create ASclass object by Seonggyun Han <hangost@ssu.ac.kr> 2017-03-01 09:53:33 +0000;
  • e9d563a bump x.y.z versions to odd 'y' after creation of 3_4 branch by Herve Pages <hpages@fhcrc.org> 2016-10-17 19:10:43 +0000;
  • 774f703 (origin/RELEASE_3_4, RELEASE_3_4) Creating branch for BioC 3.4 release by Herve Pages <hpages@fhcrc.org> 2016-10-17 19:00:47 +0000;
  • 0681eff bump x.y.z versions to even 'y' prior to creation of 3_4 branch by Herve Pages <hpages@fhcrc.org> 2016-10-17 18:45:06 +0000;
  • 52a4b21 - Debug error when result is NULL in the MsqtlFinder. - Adjust Chr names between GTF and SNP locus data. - Change test of UTR region. - Debug error in Boxplot, calSignificant and sqtlfinder. by Seonggyun Han <hangost@ssu.ac.kr> 2016-06-28 05:22:26 +0000;
  • cb89da5 bump version after creating 3.3 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2016-05-03 21:30:44 +0000;
  • 10b0f1a (origin/RELEASE_3_3, RELEASE_3_3) Creating branch for BioC 3.3 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2016-05-03 21:26:31 +0000;
  • 7fe6b2b Bump versions prior to creation of 3.3 branch by Dan Tenenbaum <dtenenba@fhcrc.org> 2016-05-03 21:20:18 +0000;
  • aacede7 Bumped version number of all packages after creation of 3.2 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-10-13 19:59:53 +0000;
  • c4c69f5 (origin/RELEASE_3_2, RELEASE_3_2) Creating branch for BioC 3.2 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-10-13 19:57:33 +0000;
  • 5b3c647 Bumped versions of all packages prior to creating 3.2 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-10-13 19:36:05 +0000;
  • 1f672d7 no need to import makeTranscriptDbFromGFF from GenomicFeatures by Herve Pages <hpages@fhcrc.org> 2015-05-03 19:13:58 +0000;
  • e9cc90a Bump versions in trunk after creation of 3.1 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-04-16 20:02:44 +0000;
  • 95213b3 (origin/RELEASE_3_1, RELEASE_3_1) Creating branch for BioC 3.1 release. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-04-16 20:00:01 +0000;
  • a8ba331 Bump versions prior to creating 3.1 branch. by Dan Tenenbaum <dtenenba@fhcrc.org> 2015-04-16 19:42:01 +0000;
  • c10672d Fix to bugs while searching SNPs in exons. Add the FDR threshold option in the MsqtlFinder function. update 0.99.6 to 0.99.7 by Seonggyun Han <hangost@ssu.ac.kr> 2015-03-10 19:15:42 +0000;
  • baa6dfd Modified Rnw file and test files (snp and snplocus). by Seonggyun Han <hangost@ssu.ac.kr> 2015-01-22 01:16:30 +0000;
  • d51ae33 Forgot to update version. by Seonggyun Han <hangost@ssu.ac.kr> 2015-01-21 01:11:40 +0000;
  • 896e103 changed test transcript DB file (trasncriptDb -> TxDb) by Seonggyun Han <hangost@ssu.ac.kr> 2015-01-21 00:30:59 +0000;
  • 619da3b Fixed bug related to processing the data and statistical models. Changed partially test files to visualize the examples. Modified the Rnw file to avoid a build error. (0.99.3 -> 0.99.4) by Seonggyun Han <hangost@ssu.ac.kr> 2015-01-19 12:37:13 +0000;
  • e823de6 Added IVAS/ GreyListChIP/ to the repos by Sonali Arora <sarora@fhcrc.org> 2015-01-14 23:51:05 +0000;