Bioconductor Code: Browse

Graph ofISAnalytics

9af855b (HEAD -> master, origin/master, origin/HEAD) updated readme status badges by Giulia Pais <giuliapais1@gmail.com> 2022-12-01 13:41:17 +0100;
ff2bcf3 (origin/RELEASE_3_16, RELEASE_3_16) Updated readme status badges by Giulia Pais <giuliapais1@gmail.com> 2022-12-01 13:30:05 +0100;
bdb88a6 updated action for codecov by Giulia Pais <giuliapais1@gmail.com> 2022-12-01 12:31:18 +0100;
4788ce9 Updated github actions by Giulia Pais <giuliapais1@gmail.com> 2022-12-01 11:44:21 +0100;
a8f7877 [U] Update to 1.9.1 by Giulia Pais <giuliapais1@gmail.com> 2022-12-01 11:33:24 +0100;
837e29e [U] Added bonferroni correction in gene_frequency_fisher by Giulia Pais <giuliapais1@gmail.com> 2022-12-01 10:17:25 +0100;
9b7eb4a [FIX] Fixed code for tidyselect warnings, minor adjustments by Giulia Pais <giuliapais1@gmail.com> 2022-11-30 17:11:17 +0100;
3545207 [U] Update to 1.8.1 by Giulia Pais <giuliapais1@gmail.com> 2022-12-01 10:44:06 +0100;
f089e59 [U] Added bonferroni correction in gene_frequency_fisher by Giulia Pais <giuliapais1@gmail.com> 2022-12-01 10:17:25 +0100;
2ff8b83 [FIX] Fixed code for tidyselect warnings, minor adjustments by Giulia Pais <giuliapais1@gmail.com> 2022-11-30 17:11:17 +0100;
cc2874a [minor] Removed github actions from branch, fixed codecov file and README by Giulia Pais <giuliapais1@gmail.com> 2022-11-02 17:52:36 +0100;
14f2669 bump x.y.z version to odd y following creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:22:44 -0400;
42aa89f bump x.y.z version to even y prior to creation of RELEASE_3_16 branch by J Wokaty <jennifer.wokaty@sph.cuny.edu> 2022-11-01 11:22:44 -0400;
5fdb85f [fix] removed image due to size issues by Giulia Pais <giuliapais1@gmail.com> 2022-10-27 12:49:58 +0200;
7e06fa0 [A] added section to workflow vignette describing shiny interface by Giulia Pais <giuliapais1@gmail.com> 2022-10-27 12:42:22 +0200;
def4e3a [U] Update to 1.7.7 by Giulia Pais <giuliapais1@gmail.com> 2022-10-26 18:40:33 +0200;
7db0dc1 [U] Update to 1.7.6 by Giulia Pais <giuliapais1@gmail.com> 2022-10-25 12:14:19 +0200;
327f1b0 [U] Fixed issues and bumb to 1.7.5 by Giulia Pais <giuliapais1@gmail.com> 2022-10-05 11:35:39 +0200;
603d063 [HOTFIX] Fixed code that broke vignette by Giulia Pais <giuliapais1@gmail.com> 2022-10-05 11:22:22 +0200;
199b9ed [HOTFIX] Modified vignette for re-build issue - 1 by Giulia Pais <giuliapais1@gmail.com> 2022-10-05 11:08:09 +0200;
31a0a6d [FIX] Fixed vignette by Giulia Pais <giuliapais1@gmail.com> 2022-10-04 15:03:47 +0200;
4b0e201 [U] Update to 1.7.4 by Giulia Pais <giuliapais1@gmail.com> 2022-10-04 14:52:48 +0200;
8c3ebef Minor fixes, testing new approaches for integrations by Giulia Pais <giuliapais1@gmail.com> 2022-07-08 11:41:16 +0200;
1a76b49 [FIX] Fixed internal of top_cis_overtime_heatmap by Giulia Pais <giuliapais1@gmail.com> 2022-06-17 19:10:34 +0200;
d209cfb [HOTFIX] Fixed typo in top_cis_overtime_heatmap by Giulia Pais <giuliapais1@gmail.com> 2022-06-17 18:58:09 +0200;
f3bdd48 [U] Update to 1.7.3 by Giulia Pais <giuliapais1@gmail.com> 2022-06-17 16:47:19 +0200;
27ee9bb (origin/RELEASE_3_15, RELEASE_3_15) [U] Update 1.6.2 by Giulia Pais <giuliapais1@gmail.com> 2022-05-23 15:49:28 +0200;
5e4067d [FIX] Fix further minor bugs by Giulia Pais <giuliapais1@gmail.com> 2022-05-23 15:11:29 +0200;
6c876db [U] Update to 1.7.2 by Giulia Pais <giuliapais1@gmail.com> 2022-05-23 15:34:48 +0200;
8d73898 [FIX] Fix further minor bugs by Giulia Pais <giuliapais1@gmail.com> 2022-05-23 15:11:29 +0200;
762f738 [FIX] Fixed minor issues in import_association_file internals by Giulia Pais <giuliapais1@gmail.com> 2022-05-19 14:06:58 +0200;
b0f2dd1 [FIX] Fixed minor issues in import_association_file internals by Giulia Pais <giuliapais1@gmail.com> 2022-05-19 14:06:58 +0200;
2458527 [U] Update 1.7.1 by Giulia Pais <giuliapais1@gmail.com> 2022-05-04 15:22:37 +0200;
a4af8eb [FIX] Fixes for next version by Giulia Pais <giuliapais1@gmail.com> 2022-05-04 14:58:45 +0200;
7ec07de [U] Update to 1.6.1 by Giulia Pais <giuliapais1@gmail.com> 2022-05-04 15:20:40 +0200;
7e13a01 [FIX] Fixes for next version by Giulia Pais <giuliapais1@gmail.com> 2022-05-04 14:58:45 +0200;
ea31487 Update .travis.yml by Giulia Pais <giuliapais1@gmail.com> 2022-04-27 12:02:06 +0200;
a2911c7 Update .travis.yml by Giulia Pais <giuliapais1@gmail.com> 2022-04-27 11:53:26 +0200;
b7d294b [FIX] fixed readme badges by Giulia Pais <giuliapais1@gmail.com> 2022-04-27 11:39:39 +0200;
9c8bf7f [U] Updated githubactions & readme for devel by Giulia Pais <giuliapais1@gmail.com> 2022-04-27 11:15:22 +0200;
93fde0e [U] Updated github actions & readme for new release by Giulia Pais <giuliapais1@gmail.com> 2022-04-27 11:00:23 +0200;
faad351 bump x.y.z version to odd y following creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 16:08:03 +0000;
6725478 bump x.y.z version to even y prior to creation of RELEASE_3_15 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2022-04-26 16:08:03 +0000;
b8dce36 [FIX] Temporary fix for Bioc build by Giulia Pais <giuliapais1@gmail.com> 2022-04-26 08:58:28 +0200;
cf1aab1 Update check-bioc.yml by Giulia Pais <giuliapais1@gmail.com> 2022-04-22 18:01:08 +0200;
27b8112 Update check-bioc.yml by Giulia Pais <giuliapais1@gmail.com> 2022-04-22 17:58:18 +0200;
23958f8 Update _pkgdown.yml by Giulia Pais <giuliapais1@gmail.com> 2022-04-21 12:06:53 +0200;
1d772af Update check-bioc.yml by Giulia Pais <giuliapais1@gmail.com> 2022-04-21 11:46:58 +0200;
6e123be Update pkgdown.yaml by Giulia Pais <giuliapais1@gmail.com> 2022-04-21 11:39:35 +0200;
2b4a9a7 [HOTFIX] Condensed vignettes due to Bioconductor package size issues by Giulia Pais <giuliapais1@gmail.com> 2022-04-21 11:37:58 +0200;
a69c1af [FIX] Fixed issues for biocheck by Giulia Pais <giuliapais1@gmail.com> 2022-04-20 22:19:41 +0200;
89d0c41 [FIX] Updated pkgdown github action by Giulia Pais <giuliapais1@gmail.com> 2022-04-20 21:27:10 +0200;
c4afb90 [UPDATE] Update to 1.5.4 by Giulia Pais <giuliapais1@gmail.com> 2022-04-20 21:09:10 +0200;
5970a6c [UPDATE] Final partial update for 1.5.4 - finished documentation, ready to merge by Giulia Pais <giuliapais1@gmail.com> 2022-04-20 17:58:57 +0200;
743f4ae [UPDATE] Partial update 1.5.4 - fixed all functions, increased package coverage, documentation still to fix by Giulia Pais <giuliapais1@gmail.com> 2022-04-15 18:47:59 +0200;
c1b6774 [UPDATE] Partial update for 1.5.4 - Updated outlier test + outlier filter and added new functionality by Giulia Pais <giuliapais1@gmail.com> 2022-04-06 17:55:00 +0200;
4235c8d [FIX] Moved shiny in Imports in DESC - for Travis build by Giulia Pais <giuliapais1@gmail.com> 2022-04-04 10:57:57 +0200;
3a301b4 [FIX] Fixed minor issue in dropdown for shiny app by Giulia Pais <giuliapais1@gmail.com> 2022-04-04 10:23:29 +0200;
577826f [FEATURE] Shiny app MVP by Giulia Pais <giuliapais1@gmail.com> 2022-04-01 18:06:56 +0200;
1eb1eaf [UPDATE] Partial update for 1.5.4 - Updated collision removal and fixed minor issues in report by Giulia Pais <giuliapais1@gmail.com> 2022-03-30 15:37:56 +0200;
82bac96 [UPDATE] Partial update for v. 1.5.4 - Updated logics for recalibration + dynamic vars by Giulia Pais <giuliapais1@gmail.com> 2022-03-28 15:01:11 +0200;
8470d68 [UPDATE] Partial update for v. 1.5.4 - major changes, switch to dynamic vars use and import functions adaptation by Giulia Pais <giuliapais1@gmail.com> 2022-03-23 17:43:23 +0100;
780bce0 [U] Update to 1.5.3 by Giulia Pais <giuliapais1@gmail.com> 2022-01-13 14:34:52 +0100;
f32c1a1 [U] For update 1.4.3 - 1.5.3 by Giulia Pais <giuliapais1@gmail.com> 2022-01-13 14:17:21 +0100;
51c47b9 (origin/RELEASE_3_14, RELEASE_3_14) [U] Update 1.4.3 by Giulia Pais <giuliapais1@gmail.com> 2022-01-13 14:23:28 +0100;
766b5d5 [U] For update 1.4.3 - 1.5.3 by Giulia Pais <giuliapais1@gmail.com> 2022-01-13 14:17:21 +0100;
46bf712 Updated logo, website and readme by Giulia Pais <giuliapais1@gmail.com> 2022-01-12 11:56:43 +0100;
7f22ff4 Fixed pkgdown github action by Giulia Pais <giuliapais1@gmail.com> 2022-01-12 11:24:30 +0100;
5f605c0 Fixed readme by Giulia Pais <giuliapais1@gmail.com> 2022-01-12 10:42:03 +0100;
320187e Updated logo and website by Giulia Pais <giuliapais1@gmail.com> 2022-01-12 10:40:27 +0100;
e3b88ac [U] Update to version 1.5.2 by Giulia Pais <giuliapais1@gmail.com> 2021-12-14 16:24:02 +0100;
d5d04fb [U] For next version - updates to aggregate_metadata and others by Giulia Pais <giuliapais1@gmail.com> 2021-12-14 13:20:39 +0100;
158017b [U] For next version - AF and file system fix by Giulia Pais <giuliapais1@gmail.com> 2021-12-13 14:42:19 +0100;
25394f7 [U] For next version - further collisions fixes by Giulia Pais <giuliapais1@gmail.com> 2021-12-09 16:54:41 +0100;
2e28663 [U] For next version - collisions and internals by Giulia Pais <giuliapais1@gmail.com> 2021-12-09 14:26:38 +0100;
a4cf650 [FIX] News fix by Giulia Pais <giuliapais1@gmail.com> 2021-12-14 13:24:10 +0100;
191c14b [U] Update to version 1.4.2 by Giulia Pais <giuliapais1@gmail.com> 2021-12-14 13:21:51 +0100;
6999099 [U] For next version - updates to aggregate_metadata and others by Giulia Pais <giuliapais1@gmail.com> 2021-12-14 13:20:39 +0100;
5be621d [U] For next version - AF and file system fix by Giulia Pais <giuliapais1@gmail.com> 2021-12-13 14:42:19 +0100;
3e1df88 [U] For next version - further collisions fixes by Giulia Pais <giuliapais1@gmail.com> 2021-12-09 16:54:41 +0100;
1d122f0 [U] Updated github actions by Giulia Pais <giuliapais1@gmail.com> 2021-12-09 16:14:30 +0100;
9a85680 [U] For next version - collisions and internals by Giulia Pais <giuliapais1@gmail.com> 2021-12-09 14:26:38 +0100;
554448c [FIX] Fixes for issues with BiocParallel on Windows - bump to 1.5.1 by Giulia Pais <giuliapais1@gmail.com> 2021-10-28 11:46:19 +0200;
80c513a Update .travis.yml by Giulia Pais <giuliapais1@gmail.com> 2021-10-28 11:44:59 +0200;
f400232 Updated pkgdown.yaml by Giulia Pais <giuliapais1@gmail.com> 2021-10-28 11:14:53 +0200;
0fed8b9 [FIX] Fixes for issues with BiocParallel on Windows - bump to 1.4.1 by Giulia Pais <giuliapais1@gmail.com> 2021-10-28 11:05:55 +0200;
eee4714 bump x.y.z version to odd y following creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 17:02:17 +0000;
3e26e8b bump x.y.z version to even y prior to creation of RELEASE_3_14 branch by Nitesh Turaga <nitesh.turaga@gmail.com> 2021-10-26 17:02:17 +0000;
c71229d [UPDATE] Update to fixed version 1.3.9 by Giulia Pais <giuliapais1@gmail.com> 2021-10-25 15:17:04 +0200;
c6fc2a0 [FIX] Fixed issues in documentation by Giulia Pais <giuliapais1@gmail.com> 2021-10-21 19:35:24 +0200;
b868004 [UPDATE] Update to version 1.3.7 by Giulia Pais <giuliapais1@gmail.com> 2021-10-20 19:04:55 +0200;
a422401 [FIX] Fixed issue in murine refGenes by Giulia Pais <giuliapais1@gmail.com> 2021-10-14 11:19:20 +0200;
0e802df [HOTFIX] Fixed minor issue in recalibration function by Giulia Pais <giuliapais1@gmail.com> 2021-10-07 10:51:09 +0200;
a4c41d1 changed readme badge by Giulia Pais <giuliapais1@gmail.com> 2021-10-06 11:04:40 +0200;
062baa2 Update README.Rmd by Giulia Pais <giuliapais1@gmail.com> 2021-10-06 11:01:44 +0200;
04a754a [FIX] Minor fixes on readme and pkgdown file by Giulia Pais <giuliapais1@gmail.com> 2021-10-06 11:00:03 +0200;
8d14af4 [UPDATE] Update version 1.3.6 by Giulia Pais <giuliapais1@gmail.com> 2021-10-05 12:05:45 +0200;
61833d0 [FIX] Fixes for package size issues by Giulia Pais <giuliapais1@gmail.com> 2021-09-27 14:23:27 +0200;
b24b0ad [UPGRADE] Upgrade to v 1.3.5 by Giulia Pais <giuliapais1@gmail.com> 2021-09-21 17:15:06 +0200;
7b9528a Update to v 1.3.4 by Giulia Pais <giuliapais1@gmail.com> 2021-08-03 18:44:36 +0200;