@@ -1,6 +1,6 @@

 Package: ISAnalytics

 Title: Analyze gene therapy vector insertion sites data identified from genomics next generation sequencing reads for clonal tracking studies

-Version: 1.3.8

+Version: 1.3.9

 Date: 2020-07-03

 Authors@R: c(

   person(given = "Andrea",

@@ -2,6 +2,13 @@

 title: "NEWS"

 output: github_document

 ---

+# ISAnalytics 1.3.9 (2021-10-25)

+

+## FIXES

+

+* Fixed issues with function that make use of BiocParallel that sometimes

+failed on Windows platform

+

 # ISAnalytics 1.3.7 (2021-10-20)

 ## NEW

@@ -1,6 +1,13 @@

 NEWS

 ================

+# ISAnalytics 1.3.9 (2021-10-25)

+

+## FIXES

+

+-   Fixed issues with function that make use of BiocParallel that

+    sometimes failed on Windows platform

+

 # ISAnalytics 1.3.7 (2021-10-20)

 ## NEW

@@ -157,7 +157,7 @@ import_single_Vispa2Matrix <- function(path,

         BiocParallel::SnowParam(

             tasks = length(chunks),

             progressbar = getOption("ISAnalytics.verbose"),

-            exportglobals = FALSE,

+            exportglobals = TRUE,

             stop.on.error = TRUE

         )

     } else {

@@ -608,7 +608,7 @@

             stop.on.error = FALSE,

             tasks = length(stats_paths$stats_files),

             progressbar = getOption("ISAnalytics.verbose"),

-            exportglobals = FALSE

+            exportglobals = TRUE

         )

     } else {

         p <- BiocParallel::MulticoreParam(

@@ -4812,7 +4812,7 @@

             p <- BiocParallel::SnowParam(

                 tasks = length(common_names),

                 progressbar = getOption("ISAnalytics.verbose"),

-                exportglobals = FALSE

+                exportglobals = TRUE

             )

         } else {

             p <- BiocParallel::MulticoreParam(

@@ -519,7 +519,7 @@ integration_alluvial_plot <- function(x,

             stop.on.error = FALSE,

             progressbar = TRUE,

             tasks = length(groups_to_plot),

-            exportglobals = FALSE

+            exportglobals = TRUE

         )

     } else {

         BiocParallel::MulticoreParam(

@@ -182,7 +182,7 @@ HSC_population_size_estimate <- function(x,

             stop.on.error = FALSE,

             tasks = length(x_subj_split),

             progressbar = getOption("ISAnalytics.verbose"),

-            exportglobals = FALSE

+            exportglobals = TRUE

         )

     } else {

         p <- BiocParallel::MulticoreParam(

@@ -130,7 +130,7 @@ compute_near_integrations <- function(x,

             stop.on.error = FALSE,

             progressbar = TRUE,

             tasks = length(split_to_process),

-            exportglobals = FALSE

+            exportglobals = TRUE

         )

     } else {

         p <- BiocParallel::MulticoreParam(

@@ -137,6 +137,13 @@ options("ISAnalytics.reports" = TRUE)

 Show more

 </summary>

+# ISAnalytics 1.3.9 (2021-10-25)

+

+## FIXES

+

+-   Fixed issues with function that make use of BiocParallel that

+    sometimes failed on Windows platform

+

 # ISAnalytics 1.3.7 (2021-10-20)

 ## NEW