@@ -131,7 +131,7 @@ default_meta_agg <- function() {

         NA, "{.col}_sum",

         "BWA_MAPPED_OVERALL", ~ sum(.x, na.rm = TRUE),

         NA, "{.col}_sum",

-        "ISS_MAPPED_PP", ~ sum(.x, na.rm = TRUE),

+        "ISS_MAPPED_OVERALL", ~ sum(.x, na.rm = TRUE),

         NA, "{.col}_sum",

         "PCRMethod", ~ paste0(unique(.x), collapse = "|"),

         NA, "{.col}",

@@ -521,12 +521,11 @@ so it is recommended to import them in the first steps of the workflow.

 To do that, you can use `import_VISPA2_stats`:

 ```{r results='hide'}

-withr::with_options(list(ISAnalytics.reports = FALSE), {

-    vispa_stats <- import_Vispa2_stats(

-        association_file = af,

-        join_with_af = FALSE

-    )

-})

+vispa_stats <- import_Vispa2_stats(

+    association_file = af,

+    join_with_af = FALSE, 

+    report_path = NULL

+)

 ```

 ```{r echo=FALSE}