Name Mode Size
..
AIC-INSPEcT-method.Rd 100644 1 kb
Extract.Rd 100644 1 kb
INSPEcT-class.Rd 100644 4 kb
INSPEcT-shinyApps.Rd 100644 1 kb
INSPEcT.Rd 100644 1 kb
INSPEcT_diffsteady-class.Rd 100644 3 kb
INSPEcT_model-class.Rd 100644 2 kb
INSPEcT_steadyNoNascent-class.Rd 100644 3 kb
PTratio.Rd 100644 1 kb
PTreg.Rd 100644 1 kb
allcounts.Rd 100644 0 kb
calculateRatePvals.Rd 100644 2 kb
chisqmodel.Rd 100644 1 kb
chisqtest.Rd 100644 1 kb
combine.Rd 100644 1 kb
compareSteady.Rd 100644 2 kb
compareSteadyNoNascent.Rd 100644 2 kb
computeConfidenceIntervals.Rd 100644 1 kb
convergence.Rd 100644 1 kb
correlationPlot.Rd 100644 1 kb
dim-INSPEcT-method.Rd 100644 1 kb
featureNames-INSPEcT-method.Rd 100644 1 kb
featureWidths.Rd 100644 0 kb
geneClass.Rd 100644 2 kb
inHeatmap.Rd 100644 2 kb
inspectFromBAM.Rd 100644 3 kb
inspectFromPCR.Rd 100644 3 kb
labeledSF.Rd 100644 1 kb
libsizes.Rd 100644 1 kb
logLik.Rd 100644 1 kb
makeModelRates.Rd 100644 1 kb
makeOscillatorySimModel.Rd 100644 2 kb
makeSimDataset.Rd 100644 2 kb
makeSimModel.Rd 100644 2 kb
mature.Rd 100644 1 kb
matureVar.Rd 100644 1 kb
modelRates.Rd 100644 3 kb
modelRatesNF.Rd 100644 1 kb
modelSelection.Rd 100644 2 kb
modelingParams.Rd 100644 2 kb
nGenes.Rd 100644 1 kb
nTpts.Rd 100644 1 kb
newINSPEcT.Rd 100644 3 kb
plotGene.Rd 100644 2 kb
plotMA.Rd 100644 2 kb
plotPMgene.Rd 100644 1 kb
plotPMtrend.Rd 100644 1 kb
premature.Rd 100644 1 kb
prematureVar.Rd 100644 1 kb
processingDelay.Rd 100644 3 kb
quantifyExpressionsFromBAMs.Rd 100644 4 kb
quantifyExpressionsFromBWs.Rd 100644 2 kb
quantifyExpressionsFromTrAbundance.Rd 100644 1 kb
quantifyExpressionsFromTrCounts.Rd 100644 3 kb
ratePvals.Rd 100644 1 kb
ratesFirstGuess.Rd 100644 1 kb
ratesFirstGuessVar.Rd 100644 1 kb
removeModel.Rd 100644 1 kb
rocCurve.Rd 100644 3 kb
rocThresholds.Rd 100644 2 kb
setConfidenceIntervals.Rd 100644 1 kb
simData3rep_Nascent.Rd 100644 0 kb
simData3rep_NoNascent.Rd 100644 1 kb
simData4rep_Nascent.Rd 100644 0 kb
simData4rep_NoNascent.Rd 100644 1 kb
split.Rd 100644 1 kb
tpts.Rd 100644 1 kb
viewConfidenceIntervals.Rd 100644 1 kb
viewModelRates.Rd 100644 1 kb