Package: HybridMTest Type: Package Title: Hybrid Multiple Testing Version: 1.51.0 Date: 2011-06-14 Author: Stan Pounds <stanley.pounds@stjude.org>, Demba Fofana <demba.fofana@stjude.org> Maintainer: Demba Fofana <demba.fofana@stjude.org> Depends: R (>= 2.9.0), Biobase, fdrtool, MASS, survival Description: Performs hybrid multiple testing that incorporates method selection and assumption evaluations into the analysis using empirical Bayes probability (EBP) estimates obtained by Grenander density estimation. For instance, for 3-group comparison analysis, Hybrid Multiple testing considers EBPs as weighted EBPs between F-test and H-test with EBPs from Shapiro Wilk test of normality as weigth. Instead of just using EBPs from F-test only or using H-test only, this methodology combines both types of EBPs through EBPs from Shapiro Wilk test of normality. This methodology uses then the law of total EBPs. License: GPL Version 2 or later Imports: stats LazyLoad: yes Packaged: 2012-03-08 16:57:04 UTC; dking biocViews: GeneExpression, Genetics, Microarray