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README.md
## HuBMAPR 'HuBMAP' data portal (<https://portal.hubmapconsortium.org/>) provides an open, global bio-molecular atlas of the human body at the cellular level. `HuBMAPR` package provides an alternative interface to access the data exploration and file retrieval via R. #### Installation `HuBMAPR` is a R package available in *Bioconductor* version 3.19 and later. You can install `HuBMAPR` by using the following commands in R session from *Bioconductor*: ``` r if (!require("BiocManager", quietly = TRUE)) install.packages("BiocManager") BiocManager::install("HuBMAPR") ## Check Bioconductor installation BiocManager::valid() ``` Additionally, you can install development version from [GitHub](https://christinehou11.github.io/HuBMAPR): ``` r BiocManager::install("christinehou11/HuBMAPR") ``` #### Use View the article [Explore Human BioMelecular Atlas Program Data Portal](https://christinehou11.github.io/HuBMAPR/articles/hubmapr_vignettes.html). ### Preprint Pre-print: https://www.biorxiv.org/content/10.1101/2024.09.26.615227v1