Package: HTSeqGenie
Imports:
    BiocGenerics (>= 0.2.0),
    S4Vectors (>= 0.9.25),
    IRanges (>= 1.21.39),
    GenomicRanges (>= 1.23.21),
    Rsamtools (>= 1.8.5),
    Biostrings (>= 2.24.1),
    chipseq (>= 1.6.1),
    hwriter (>= 1.3.0),
    Cairo (>= 1.5.5),
    GenomicFeatures (>= 1.9.31),
    BiocParallel,
    parallel,
    tools,
    rtracklayer (>= 1.17.19),
    GenomicAlignments,
    VariantTools (>= 1.7.7),
    GenomeInfoDb,
    SummarizedExperiment,
    methods
Maintainer: Jens Reeder <reeder.jens@gene.com>
License: Artistic-2.0
Title: A NGS analysis pipeline.
Type: Package
LazyLoad: yes
Author: Gregoire Pau, Jens Reeder
Description: Libraries to perform NGS analysis.
Version: 4.29.1
Depends:
    R (>= 3.0.0),
    gmapR (>= 1.8.0),
    ShortRead (>= 1.19.13),
    VariantAnnotation (>= 1.8.3)
Suggests:
    TxDb.Hsapiens.UCSC.hg19.knownGene,
    LungCancerLines,
    org.Hs.eg.db
RoxygenNote: 5.0.1