May 13, 2013
View 7124b9c

porting a fix for the chromosome replacement method back to this version

Florian Hahne authored on 13/05/2013 13:33:45
December 3, 2012
View 1d2037f

fixing problems in the color mapping of ideogram tracks that where caused by the recent harmonization of colors via the biovizBase package

Florian Hahne authored on 03/12/2012 16:03:03
October 1, 2012
View e7ed12c

Creating branch for BioC 2.11 release.

Dan Tenenbaum authored on 01/10/2012 22:37:11
View dc99569

Bump all packages before creating 2.11 branch.

Dan Tenenbaum authored on 01/10/2012 22:16:24
September 17, 2012
View c80f2dd

suppressing warning when assigning genomes to empty track objects

Florian Hahne authored on 17/09/2012 14:33:28
September 16, 2012
View 4c62b99

fixing bug in genome assignments

Florian Hahne authored on 16/09/2012 18:59:54
September 14, 2012
View 8092540

accidentally made reverseStacking the default. changed that now back to the old way

Florian Hahne authored on 14/09/2012 09:26:21
September 13, 2012
View d82ff82

making sure that the genome is also set for the GRanges objects that make up a RangeTrack

Florian Hahne authored on 13/09/2012 13:20:56
View 9d2db0a

adding reverseStacking parameter to reverse the horizontal ordering of stacked items

Florian Hahne authored on 13/09/2012 08:25:34
View 001bc25

identifier would fail for AnnotationTracks if the symbols contained NAs

Florian Hahne authored on 13/09/2012 07:54:21
September 11, 2012
View 4e8ecc1

Before the coersion method from TranscriptDb to GeneRegionTrack was missing the non-coding exons. This is now fixed

Florian Hahne authored on 11/09/2012 12:22:36
September 4, 2012
View 4900c30

adding a NEWS file

Florian Hahne authored on 04/09/2012 08:14:44
September 3, 2012
View 6a67da2

Adding a SequenceTrack class and enabling non-coding regions in GeneRegionTrack classes

Florian Hahne authored on 03/09/2012 16:59:26
July 18, 2012
View faa55c6

some improvements to the vignette

Florian Hahne authored on 18/07/2012 10:42:24
July 17, 2012
View 7a8eb26

fixing some non-ascii characters in the vignette that broke things

Florian Hahne authored on 17/07/2012 15:40:47