Package: GreyListChIP
Type: Package
Version: 1.35.0
Title: Grey Lists -- Mask Artefact Regions Based on ChIP Inputs
Date: 2020-07-29
Authors@R: c(person("Matt","Eldridge", email="",
                  role = c("cre")),
Description: Identify regions of ChIP experiments with high signal in
        the input, that lead to spurious peaks during peak calling.
        Remove reads aligning to these regions prior to peak calling,
        for cleaner ChIP analysis.
License: Artistic-2.0
LazyLoad: yes
Depends: R (>= 4.0), methods, GenomicRanges
Imports: GenomicAlignments, BSgenome, Rsamtools, rtracklayer, MASS,
        parallel, GenomeInfoDb, SummarizedExperiment, stats,
Suggests: BiocStyle, BiocGenerics, RUnit, BSgenome.Hsapiens.UCSC.hg19
biocViews: ChIPSeq, Alignment, Preprocessing, DifferentialPeakCalling,
        Sequencing, GenomeAnnotation, Coverage